Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm12103-201ENSMUST00000121892 362 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm2182-201ENSMUST00000145243 663 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm22529-201ENSMUST00000158817 123 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm22530-201ENSMUST00000158820 118 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Mir3062-201ENSMUST00000174986 105 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm27190-201ENSMUST00000184890 542 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm29428-201ENSMUST00000190086 409 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm37878-201ENSMUST00000192108 387 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm2979-201ENSMUST00000193442 463 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm37836-201ENSMUST00000195875 175 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 AC156803.1-201ENSMUST00000224407 820 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 AC106830.1-201ENSMUST00000228032 1003 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Mir28a-201ENSMUST00000083560 86 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm38010-201ENSMUST00000192592 2784 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm24608-201ENSMUST00000104381 136 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm14365-201ENSMUST00000117535 587 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm14876-201ENSMUST00000120795 327 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm12466-201ENSMUST00000121199 620 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm3053-201ENSMUST00000161709 616 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm17711-201ENSMUST00000172028 237 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm29228-201ENSMUST00000185489 418 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm45269-201ENSMUST00000210359 282 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm18871-201ENSMUST00000218655 745 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm43009-201ENSMUST00000199979 3566 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Gm37569-201ENSMUST00000192111 1722 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim58Q5NCC9 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Gm15403-201ENSMUST00000119343 1227 ntBASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Gm25603-201ENSMUST00000158361 105 ntBASIC5.27□□□□□ -1.57
Trim58Q5NCC9 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Mir6537-201ENSMUST00000184150 110 ntBASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Gm44376-201ENSMUST00000197570 128 ntBASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Gm22897-202ENSMUST00000197782 127 ntBASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.27□□□□□ -1.57
Trim58Q5NCC9 AC110816.1-201ENSMUST00000218559 980 ntBASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim58Q5NCC9 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm44434-201ENSMUST00000203918 3745 ntBASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm15076-201ENSMUST00000117076 474 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms