Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm14878-201ENSMUST00000118167 293 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm14714-201ENSMUST00000119743 439 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm9435-201ENSMUST00000120379 877 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm13460-201ENSMUST00000121274 353 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm28190-201ENSMUST00000189766 722 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm37878-201ENSMUST00000192108 387 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm29747-201ENSMUST00000194764 585 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm37167-201ENSMUST00000194946 396 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm17956-201ENSMUST00000199931 838 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm9655-201ENSMUST00000211321 1284 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm46138-201ENSMUST00000215294 426 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Nsa2-203ENSMUST00000225410 974 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm15333-201ENSMUST00000118825 364 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm11584-201ENSMUST00000120636 325 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm26355-201ENSMUST00000158220 105 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm18128-201ENSMUST00000172625 511 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm6155-201ENSMUST00000173735 341 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm19908-201ENSMUST00000204684 391 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm18877-201ENSMUST00000207706 539 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm6988-201ENSMUST00000222676 375 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trafd1Q3UDK1 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Gm14628-201ENSMUST00000117508 635 ntBASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Gm12807-201ENSMUST00000121546 962 ntBASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms