Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Mir706-201ENSMUST00000102262 84 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm14995-201ENSMUST00000117135 391 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm7312-201ENSMUST00000118798 469 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm11843-201ENSMUST00000118984 425 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm13059-201ENSMUST00000119881 398 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm13132-201ENSMUST00000121194 472 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm14162-201ENSMUST00000121985 601 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm4725-201ENSMUST00000151048 587 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm27033-201ENSMUST00000183226 544 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm18984-201ENSMUST00000193998 1124 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm20056-201ENSMUST00000194813 519 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm42663-201ENSMUST00000199883 351 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm42796-201ENSMUST00000199913 1087 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm17911-201ENSMUST00000210806 877 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm7040-201ENSMUST00000223271 443 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm5215-201ENSMUST00000054380 405 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm24166-201ENSMUST00000082724 135 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm23514-201ENSMUST00000082827 130 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm5583-201ENSMUST00000174328 1519 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm22370-201ENSMUST00000102422 83 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm14385-201ENSMUST00000116315 876 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm16400-201ENSMUST00000116523 1029 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm16259-201ENSMUST00000145241 553 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm23537-201ENSMUST00000157536 330 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm24690-201ENSMUST00000157759 97 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm25714-201ENSMUST00000158626 296 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm24969-201ENSMUST00000180331 79 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm8614-201ENSMUST00000182528 978 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm8669-201ENSMUST00000183839 945 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm44681-201ENSMUST00000208447 842 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Gm45551-201ENSMUST00000211459 928 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Brf2Q3UAW9 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.57□□□□□ -1.68
Brf2Q3UAW9 AC117656.3-204ENSMUST00000225656 859 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms