Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.68□□□□□ -1.5
Ebf1Q07802 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
Ebf1Q07802 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.68□□□□□ -1.5
Ebf1Q07802 Gm17054-201ENSMUST00000169811 259 ntBASIC5.68□□□□□ -1.5
Ebf1Q07802 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.68□□□□□ -1.5
Ebf1Q07802 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC5.68□□□□□ -1.5
Ebf1Q07802 Gm22355-201ENSMUST00000175531 96 ntBASIC5.68□□□□□ -1.5
Ebf1Q07802 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.68□□□□□ -1.5
Ebf1Q07802 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC5.68□□□□□ -1.5
Ebf1Q07802 Gm26925-201ENSMUST00000182470 957 ntBASIC5.68□□□□□ -1.5
Ebf1Q07802 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ebf1Q07802 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ebf1Q07802 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.68□□□□□ -1.5
Ebf1Q07802 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.68□□□□□ -1.5
Ebf1Q07802 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.68□□□□□ -1.5
Ebf1Q07802 Gm18904-201ENSMUST00000218756 329 ntBASIC5.68□□□□□ -1.5
Ebf1Q07802 Gm8681-201ENSMUST00000219115 618 ntBASIC5.68□□□□□ -1.5
Ebf1Q07802 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.68□□□□□ -1.5
Ebf1Q07802 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.68□□□□□ -1.5
Ebf1Q07802 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ebf1Q07802 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ebf1Q07802 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ebf1Q07802 Mir325-201ENSMUST00000083491 98 ntBASIC5.68□□□□□ -1.5
Ebf1Q07802 Gm23795-201ENSMUST00000084006 137 ntBASIC5.68□□□□□ -1.5
Ebf1Q07802 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ebf1Q07802 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ebf1Q07802 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ebf1Q07802 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ebf1Q07802 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.68□□□□□ -1.5
Ebf1Q07802 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ebf1Q07802 Gm42483-201ENSMUST00000197556 1742 ntBASIC5.68□□□□□ -1.5
Ebf1Q07802 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.68□□□□□ -1.5
Ebf1Q07802 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.68□□□□□ -1.5
Ebf1Q07802 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ebf1Q07802 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ebf1Q07802 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ebf1Q07802 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.67□□□□□ -1.5
Ebf1Q07802 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm9496-201ENSMUST00000191295 1601 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ebf1Q07802 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ebf1Q07802 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ebf1Q07802 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm15490-201ENSMUST00000119894 387 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm12900-201ENSMUST00000120919 573 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm12732-201ENSMUST00000121688 180 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm16362-201ENSMUST00000135189 214 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm23965-201ENSMUST00000157969 142 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm22312-201ENSMUST00000158005 130 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm22076-201ENSMUST00000158601 84 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm6673-201ENSMUST00000166114 700 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ebf1Q07802 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm4845-201ENSMUST00000179202 562 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm27599-201ENSMUST00000183758 174 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.67□□□□□ -1.5
Ebf1Q07802 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm37501-201ENSMUST00000192830 691 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm42805-201ENSMUST00000196158 276 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm42924-201ENSMUST00000197261 185 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC5.67□□□□□ -1.5
Ebf1Q07802 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm45409-201ENSMUST00000211486 252 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Olfr936-202ENSMUST00000216912 937 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.67□□□□□ -1.5
Ebf1Q07802 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm24043-201ENSMUST00000083108 116 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ebf1Q07802 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ebf1Q07802 Gm10356-201ENSMUST00000097152 1258 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.67□□□□□ -1.5
Ebf1Q07802 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ebf1Q07802 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ebf1Q07802 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.67□□□□□ -1.5
Ebf1Q07802 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ebf1Q07802 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ebf1Q07802 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ebf1Q07802 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC5.67□□□□□ -1.5
Ebf1Q07802 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ebf1Q07802 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ebf1Q07802 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ebf1Q07802 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ebf1Q07802 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.66□□□□□ -1.5
Ebf1Q07802 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ebf1Q07802 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ebf1Q07802 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms