Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm22391-201ENSMUST00000180356 79 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm43354-201ENSMUST00000196862 346 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm43855-201ENSMUST00000197462 507 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm8942-201ENSMUST00000217892 400 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 AC154636.2-201ENSMUST00000222538 161 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 AC147633.1-201ENSMUST00000225134 259 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 CT956049.1-201ENSMUST00000225671 763 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 AC161609.1-201ENSMUST00000225878 474 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm8074-201ENSMUST00000095071 252 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col9a1Q05722 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col9a1Q05722 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col9a1Q05722 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Col9a1Q05722 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
Col9a1Q05722 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
Col9a1Q05722 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
Col9a1Q05722 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col9a1Q05722 AC107453.1-201ENSMUST00000227490 3268 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm18305-201ENSMUST00000216532 2128 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Col9a1Q05722 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Col9a1Q05722 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col9a1Q05722 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm11833-201ENSMUST00000118393 853 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm14940-201ENSMUST00000119309 495 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm13737-201ENSMUST00000119793 232 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm11830-201ENSMUST00000120175 561 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm26278-201ENSMUST00000157098 132 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm22724-201ENSMUST00000158091 127 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm24228-201ENSMUST00000158829 129 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm24713-201ENSMUST00000178850 107 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm25448-201ENSMUST00000180065 107 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm29350-201ENSMUST00000189141 541 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm2367-201ENSMUST00000192374 472 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm37701-201ENSMUST00000192947 1100 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm43105-201ENSMUST00000202987 459 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm45252-201ENSMUST00000211579 397 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.7□□□□□ -1.34
Col9a1Q05722 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col9a1Q05722 Mir331-201ENSMUST00000083673 96 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.7□□□□□ -1.34
Col9a1Q05722 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC6.7□□□□□ -1.34
Col9a1Q05722 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col9a1Q05722 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col9a1Q05722 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 AC164978.1-201ENSMUST00000228608 4011 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC6.7□□□□□ -1.34
Col9a1Q05722 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.7□□□□□ -1.34
Col9a1Q05722 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col9a1Q05722 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC6.7□□□□□ -1.34
Col9a1Q05722 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC6.7□□□□□ -1.34
Col9a1Q05722 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC6.69□□□□□ -1.34
Col9a1Q05722 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
Col9a1Q05722 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col9a1Q05722 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col9a1Q05722 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col9a1Q05722 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
Col9a1Q05722 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC6.69□□□□□ -1.34
Col9a1Q05722 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col9a1Q05722 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm22831-201ENSMUST00000102473 109 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Col9a1Q05722 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm22106-201ENSMUST00000122544 127 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm5699-201ENSMUST00000152491 723 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm26348-201ENSMUST00000157528 240 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm23892-201ENSMUST00000158105 130 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms