Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 AC144628.2-201ENSMUST00000227374 352 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 AC154846.2-201ENSMUST00000228805 424 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm25187-201ENSMUST00000083906 133 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
Col8a1Q00780 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm43788-201ENSMUST00000201539 2417 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm42513-201ENSMUST00000197831 2119 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm8401-201ENSMUST00000120248 1739 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col8a1Q00780 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col8a1Q00780 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col8a1Q00780 AC098728.1-202ENSMUST00000226656 2198 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm38036-201ENSMUST00000194586 3564 ntBASIC4.96□□□□□ -1.61
Col8a1Q00780 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.61
Col8a1Q00780 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.96□□□□□ -1.61
Col8a1Q00780 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.61
Col8a1Q00780 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col8a1Q00780 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col8a1Q00780 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col8a1Q00780 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col8a1Q00780 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
Col8a1Q00780 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm12878-201ENSMUST00000118744 332 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm13603-201ENSMUST00000119404 83 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm12638-201ENSMUST00000119531 298 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm12515-201ENSMUST00000120116 361 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col8a1Q00780 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col8a1Q00780 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm27342-201ENSMUST00000183530 109 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm28149-201ENSMUST00000187102 378 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm28768-201ENSMUST00000189034 378 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col8a1Q00780 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm37511-201ENSMUST00000192901 294 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Mir5121-201ENSMUST00000198528 74 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm43561-201ENSMUST00000199866 448 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm32158-201ENSMUST00000200135 404 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm44149-201ENSMUST00000204256 226 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm19237-201ENSMUST00000205036 1132 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm7780-201ENSMUST00000214787 406 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm29818-201ENSMUST00000218070 165 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm18904-201ENSMUST00000218756 329 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.96□□□□□ -1.62
Col8a1Q00780 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col8a1Q00780 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Col8a1Q00780 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Col8a1Q00780 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col8a1Q00780 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col8a1Q00780 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm8750-201ENSMUST00000173278 1537 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm45562-201ENSMUST00000210015 1537 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col8a1Q00780 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm43092-201ENSMUST00000202986 1854 ntBASIC4.96□□□□□ -1.62
Col8a1Q00780 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col8a1Q00780 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.96□□□□□ -1.62
Col8a1Q00780 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col8a1Q00780 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col8a1Q00780 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col8a1Q00780 Gm8979-201ENSMUST00000183386 7296 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm42483-201ENSMUST00000197556 1742 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms