Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC2.85□□□□□ -1.95
PrkdcP97313 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PrkdcP97313 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PrkdcP97313 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
PrkdcP97313 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PrkdcP97313 Gm37742-201ENSMUST00000193263 3979 ntBASIC2.85□□□□□ -1.95
PrkdcP97313 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PrkdcP97313 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.85□□□□□ -1.95
PrkdcP97313 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
PrkdcP97313 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC2.85□□□□□ -1.95
PrkdcP97313 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PrkdcP97313 Gm12173-201ENSMUST00000117622 273 ntBASIC2.85□□□□□ -1.95
PrkdcP97313 Gm12704-201ENSMUST00000119789 464 ntBASIC2.85□□□□□ -1.95
PrkdcP97313 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.85□□□□□ -1.95
PrkdcP97313 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.85□□□□□ -1.95
PrkdcP97313 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.85□□□□□ -1.95
PrkdcP97313 AC127270.2-201ENSMUST00000221337 247 ntBASIC2.85□□□□□ -1.95
PrkdcP97313 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PrkdcP97313 Gm25200-201ENSMUST00000083094 130 ntBASIC2.85□□□□□ -1.95
PrkdcP97313 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC2.85□□□□□ -1.95
PrkdcP97313 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PrkdcP97313 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC2.85□□□□□ -1.95
PrkdcP97313 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
PrkdcP97313 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
PrkdcP97313 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PrkdcP97313 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PrkdcP97313 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
PrkdcP97313 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PrkdcP97313 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PrkdcP97313 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
PrkdcP97313 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PrkdcP97313 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PrkdcP97313 Gm9119-201ENSMUST00000118866 495 ntBASIC2.85□□□□□ -1.95
PrkdcP97313 Gm17046-201ENSMUST00000168078 850 ntBASIC2.85□□□□□ -1.95
PrkdcP97313 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC2.85□□□□□ -1.95
PrkdcP97313 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PrkdcP97313 Gm23215-201ENSMUST00000178153 121 ntBASIC2.85□□□□□ -1.95
PrkdcP97313 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC2.85□□□□□ -1.95
PrkdcP97313 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC2.85□□□□□ -1.95
PrkdcP97313 AC132237.2-201ENSMUST00000221702 1209 ntBASIC2.85□□□□□ -1.95
PrkdcP97313 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PrkdcP97313 Snora70-201ENSMUST00000083047 137 ntBASIC2.85□□□□□ -1.95
PrkdcP97313 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
PrkdcP97313 Gm3972-201ENSMUST00000173960 2861 ntBASIC2.85□□□□□ -1.95
PrkdcP97313 Gm37461-201ENSMUST00000193929 3704 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 CT009734.1-201ENSMUST00000227657 1687 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PrkdcP97313 Gm14516-201ENSMUST00000120012 252 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
PrkdcP97313 Gm26045-201ENSMUST00000157862 97 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Gm22840-201ENSMUST00000158444 136 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PrkdcP97313 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
PrkdcP97313 Gm44393-201ENSMUST00000197418 138 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 AC115291.2-201ENSMUST00000228335 437 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
PrkdcP97313 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PrkdcP97313 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PrkdcP97313 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
PrkdcP97313 Gm38253-201ENSMUST00000194058 4678 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
PrkdcP97313 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
PrkdcP97313 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
PrkdcP97313 Gm44860-201ENSMUST00000208473 2346 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
PrkdcP97313 Gm26273-201ENSMUST00000104180 131 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Gm3835-201ENSMUST00000120752 403 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Gm7618-201ENSMUST00000121643 171 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Gm26141-201ENSMUST00000175299 126 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Gm27266-201ENSMUST00000184521 123 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Gm18529-201ENSMUST00000193025 1257 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Gm44611-201ENSMUST00000207507 355 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Gm6991-201ENSMUST00000218475 1178 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 AC124524.2-201ENSMUST00000223940 588 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PrkdcP97313 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
PrkdcP97313 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC2.84□□□□□ -1.95
PrkdcP97313 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
PrkdcP97313 Gm37777-201ENSMUST00000195546 3366 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PrkdcP97313 AC123705.2-201ENSMUST00000221653 2009 ntBASIC2.84□□□□□ -1.95
PrkdcP97313 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
PrkdcP97313 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PrkdcP97313 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
PrkdcP97313 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
PrkdcP97313 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
PrkdcP97313 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC2.84□□□□□ -1.96
PrkdcP97313 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
PrkdcP97313 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.84□□□□□ -1.96
PrkdcP97313 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC2.84□□□□□ -1.96
PrkdcP97313 Gm45070-201ENSMUST00000208100 246 ntBASIC2.84□□□□□ -1.96
PrkdcP97313 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
PrkdcP97313 AC118733.1-201ENSMUST00000217387 1217 ntBASIC2.84□□□□□ -1.96
PrkdcP97313 Gm25480-201ENSMUST00000083217 133 ntBASIC2.84□□□□□ -1.96
PrkdcP97313 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
PrkdcP97313 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.96
PrkdcP97313 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
PrkdcP97313 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC2.84□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms