Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sf3b6P59708 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sf3b6P59708 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sf3b6P59708 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sf3b6P59708 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sf3b6P59708 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm11409-201ENSMUST00000118621 403 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm6744-201ENSMUST00000119303 543 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm11609-201ENSMUST00000121926 793 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sf3b6P59708 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm25150-201ENSMUST00000157121 60 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm22563-201ENSMUST00000157333 269 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Snora47-201ENSMUST00000157483 138 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm26353-201ENSMUST00000158224 255 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm24550-201ENSMUST00000158648 279 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm27161-201ENSMUST00000183960 562 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm5260-201ENSMUST00000186157 949 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm29148-201ENSMUST00000188140 336 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.25□□□□□ -1.57
Sf3b6P59708 AC099760.1-201ENSMUST00000196300 153 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm42475-201ENSMUST00000201212 295 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm43798-201ENSMUST00000202056 394 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm18600-201ENSMUST00000207205 505 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm45023-201ENSMUST00000207951 379 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm45588-201ENSMUST00000211213 630 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Sf3b6P59708 AC122924.2-201ENSMUST00000220799 298 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Sf3b6P59708 AC104832.1-201ENSMUST00000222938 550 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC5.25□□□□□ -1.57
Sf3b6P59708 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm7984-201ENSMUST00000060640 538 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm25133-201ENSMUST00000082647 130 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Gm24610-201ENSMUST00000083270 109 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Snora30-201ENSMUST00000083325 130 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sf3b6P59708 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Sf3b6P59708 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Sf3b6P59708 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sf3b6P59708 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.25□□□□□ -1.57
Sf3b6P59708 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sf3b6P59708 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sf3b6P59708 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sf3b6P59708 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sf3b6P59708 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sf3b6P59708 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sf3b6P59708 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm11799-201ENSMUST00000116110 460 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm14995-201ENSMUST00000117135 391 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm13804-201ENSMUST00000119552 172 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm14267-201ENSMUST00000119751 496 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm14784-201ENSMUST00000121604 663 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm25365-201ENSMUST00000158852 121 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm20480-201ENSMUST00000173953 250 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm26970-201ENSMUST00000182990 964 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms