Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cdh11P55288 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdh11P55288 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cdh11P55288 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdh11P55288 Gm9597-202ENSMUST00000227632 1387 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdh11P55288 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm23193-201ENSMUST00000102427 82 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm12760-201ENSMUST00000117861 482 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm11790-201ENSMUST00000119569 455 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm12327-201ENSMUST00000121729 1168 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm13232-201ENSMUST00000121816 632 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm15227-201ENSMUST00000121844 399 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm13149-201ENSMUST00000122071 339 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm14800-201ENSMUST00000122084 1272 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4.32□□□□□ -1.72
Cdh11P55288 Gm12854-201ENSMUST00000128518 297 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm24664-201ENSMUST00000158939 100 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm3531-201ENSMUST00000162698 489 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm2966-201ENSMUST00000166052 481 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm17204-201ENSMUST00000167936 478 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm27033-201ENSMUST00000183226 544 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm28191-201ENSMUST00000189112 211 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm17953-201ENSMUST00000192061 667 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.32□□□□□ -1.72
Cdh11P55288 Gm17911-201ENSMUST00000210806 877 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm29785-201ENSMUST00000217033 383 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm7045-201ENSMUST00000221466 605 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 AC132881.2-201ENSMUST00000225474 709 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cdh11P55288 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cdh11P55288 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cdh11P55288 Gm7665-201ENSMUST00000076710 297 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm16415-201ENSMUST00000080097 489 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm5185-201ENSMUST00000080271 619 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Gm10916-201ENSMUST00000080330 483 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdh11P55288 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.32□□□□□ -1.72
Cdh11P55288 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cdh11P55288 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdh11P55288 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cdh11P55288 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdh11P55288 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdh11P55288 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdh11P55288 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdh11P55288 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.32□□□□□ -1.72
Cdh11P55288 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdh11P55288 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdh11P55288 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Cdh11P55288 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.32□□□□□ -1.72
Cdh11P55288 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdh11P55288 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cdh11P55288 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cdh11P55288 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Cdh11P55288 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC4.31□□□□□ -1.72
Cdh11P55288 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdh11P55288 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
Cdh11P55288 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Cdh11P55288 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cdh11P55288 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cdh11P55288 Gm24117-201ENSMUST00000103973 133 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdh11P55288 Gm15779-201ENSMUST00000117470 412 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Gm16128-201ENSMUST00000117855 626 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Mup-ps21-201ENSMUST00000119998 448 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.31□□□□□ -1.72
Cdh11P55288 Gm25713-201ENSMUST00000158625 109 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Gm17194-201ENSMUST00000164610 348 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Gm8214-201ENSMUST00000172123 351 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.31□□□□□ -1.72
Cdh11P55288 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdh11P55288 Gm28957-201ENSMUST00000190174 373 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cdh11P55288 Gm36998-201ENSMUST00000193205 704 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Gm5842-201ENSMUST00000195073 622 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Gm17967-201ENSMUST00000195319 647 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Gm8891-201ENSMUST00000198546 832 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Gm44779-201ENSMUST00000206937 708 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Gm18877-201ENSMUST00000207706 539 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Gm17766-201ENSMUST00000209223 442 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Gm2607-201ENSMUST00000212389 627 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.31□□□□□ -1.72
Cdh11P55288 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Gm3086-202ENSMUST00000221248 310 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cdh11P55288 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdh11P55288 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cdh11P55288 Gm22043-201ENSMUST00000082993 158 ntBASIC4.31□□□□□ -1.72
Cdh11P55288 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cdh11P55288 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms