Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC6.41□□□□□ -1.38
Cux1P53564 Gm29634-201ENSMUST00000188467 696 ntBASIC6.41□□□□□ -1.38
Cux1P53564 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC6.41□□□□□ -1.38
Cux1P53564 Gm28699-201ENSMUST00000189193 696 ntBASIC6.41□□□□□ -1.38
Cux1P53564 Gm7034-201ENSMUST00000218638 645 ntBASIC6.41□□□□□ -1.38
Cux1P53564 AC121898.1-201ENSMUST00000227599 288 ntBASIC6.41□□□□□ -1.38
Cux1P53564 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cux1P53564 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cux1P53564 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cux1P53564 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
Cux1P53564 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cux1P53564 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cux1P53564 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Cux1P53564 Gm25764-201ENSMUST00000104092 134 ntBASIC6.4□□□□□ -1.38
Cux1P53564 Gm12760-201ENSMUST00000117861 482 ntBASIC6.4□□□□□ -1.38
Cux1P53564 Gm6079-201ENSMUST00000121356 404 ntBASIC6.4□□□□□ -1.38
Cux1P53564 Gm16134-201ENSMUST00000161714 336 ntBASIC6.4□□□□□ -1.38
Cux1P53564 Gm27190-201ENSMUST00000184890 542 ntBASIC6.4□□□□□ -1.38
Cux1P53564 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC6.4□□□□□ -1.38
Cux1P53564 Gm37001-201ENSMUST00000193377 190 ntBASIC6.4□□□□□ -1.38
Cux1P53564 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC6.4□□□□□ -1.38
Cux1P53564 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC6.4□□□□□ -1.38
Cux1P53564 Gm6929-201ENSMUST00000210930 468 ntBASIC6.4□□□□□ -1.38
Cux1P53564 Gm10916-201ENSMUST00000080330 483 ntBASIC6.4□□□□□ -1.38
Cux1P53564 Gm25200-201ENSMUST00000083094 130 ntBASIC6.4□□□□□ -1.38
Cux1P53564 Mir370-201ENSMUST00000083499 79 ntBASIC6.4□□□□□ -1.38
Cux1P53564 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cux1P53564 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Cux1P53564 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cux1P53564 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Cux1P53564 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cux1P53564 AC167360.1-201ENSMUST00000222596 2494 ntBASIC6.4□□□□□ -1.38
Cux1P53564 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC6.4□□□□□ -1.38
Cux1P53564 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Cux1P53564 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC6.4□□□□□ -1.39
Cux1P53564 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Cux1P53564 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cux1P53564 Gm12571-201ENSMUST00000118132 243 ntBASIC6.4□□□□□ -1.39
Cux1P53564 Gm11645-201ENSMUST00000121589 649 ntBASIC6.4□□□□□ -1.39
Cux1P53564 Gm11403-201ENSMUST00000122195 369 ntBASIC6.4□□□□□ -1.39
Cux1P53564 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Cux1P53564 Gm4487-201ENSMUST00000150617 442 ntBASIC6.4□□□□□ -1.39
Cux1P53564 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Cux1P53564 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Cux1P53564 Gm4644-201ENSMUST00000197587 400 ntBASIC6.4□□□□□ -1.39
Cux1P53564 Gm43814-201ENSMUST00000197851 413 ntBASIC6.4□□□□□ -1.39
Cux1P53564 Igkv8-31-201ENSMUST00000200040 372 ntBASIC6.4□□□□□ -1.39
Cux1P53564 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC6.4□□□□□ -1.39
Cux1P53564 AC154727.1-201ENSMUST00000226537 499 ntBASIC6.4□□□□□ -1.39
Cux1P53564 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cux1P53564 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cux1P53564 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Cux1P53564 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cux1P53564 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cux1P53564 Gm45137-201ENSMUST00000208652 4415 ntBASIC6.39□□□□□ -1.39
Cux1P53564 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Cux1P53564 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC6.39□□□□□ -1.39
Cux1P53564 Gm15141-201ENSMUST00000121860 729 ntBASIC6.39□□□□□ -1.39
Cux1P53564 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cux1P53564 Spin2g-201ENSMUST00000178425 687 ntBASIC6.39□□□□□ -1.39
Cux1P53564 Gm28396-201ENSMUST00000190309 379 ntBASIC6.39□□□□□ -1.39
Cux1P53564 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC6.39□□□□□ -1.39
Cux1P53564 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC6.39□□□□□ -1.39
Cux1P53564 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC6.39□□□□□ -1.39
Cux1P53564 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cux1P53564 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Cux1P53564 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cux1P53564 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cux1P53564 AC154323.3-201ENSMUST00000226927 1660 ntBASIC6.38□□□□□ -1.39
Cux1P53564 Gm38235-201ENSMUST00000194600 4952 ntBASIC6.38□□□□□ -1.39
Cux1P53564 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cux1P53564 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cux1P53564 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Cux1P53564 Gm42768-201ENSMUST00000197734 2897 ntBASIC6.38□□□□□ -1.39
Cux1P53564 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cux1P53564 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cux1P53564 Gm11719-201ENSMUST00000119399 351 ntBASIC6.38□□□□□ -1.39
Cux1P53564 Gm11255-201ENSMUST00000120448 1180 ntBASIC6.38□□□□□ -1.39
Cux1P53564 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cux1P53564 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC6.38□□□□□ -1.39
Cux1P53564 Gm25572-201ENSMUST00000157527 172 ntBASIC6.38□□□□□ -1.39
Cux1P53564 Gm23865-201ENSMUST00000157723 97 ntBASIC6.38□□□□□ -1.39
Cux1P53564 Gm24534-201ENSMUST00000157949 291 ntBASIC6.38□□□□□ -1.39
Cux1P53564 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cux1P53564 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cux1P53564 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC6.38□□□□□ -1.39
Cux1P53564 Gm45574-201ENSMUST00000210921 331 ntBASIC6.38□□□□□ -1.39
Cux1P53564 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC6.38□□□□□ -1.39
Cux1P53564 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Cux1P53564 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Cux1P53564 Gm38020-201ENSMUST00000193066 4676 ntBASIC6.38□□□□□ -1.39
Cux1P53564 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cux1P53564 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cux1P53564 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cux1P53564 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cux1P53564 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Cux1P53564 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC6.37□□□□□ -1.39
Cux1P53564 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Cux1P53564 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cux1P53564 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms