Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.71□□□□□ -1.33
Rfx1P48377 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Rfx1P48377 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Rfx1P48377 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.71□□□□□ -1.34
Rfx1P48377 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC6.71□□□□□ -1.34
Rfx1P48377 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC6.71□□□□□ -1.34
Rfx1P48377 Gm14927-201ENSMUST00000120283 454 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Gm11879-201ENSMUST00000121885 702 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Gm12438-201ENSMUST00000122034 336 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.71□□□□□ -1.34
Rfx1P48377 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC6.71□□□□□ -1.34
Rfx1P48377 Gm25966-201ENSMUST00000157169 117 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Gm25433-201ENSMUST00000158283 286 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Gm25163-201ENSMUST00000158905 104 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Gm16101-201ENSMUST00000160695 430 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Rfx1P48377 Gm24812-201ENSMUST00000175315 284 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Mir7082-201ENSMUST00000183526 92 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Gm5260-201ENSMUST00000186157 949 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC6.71□□□□□ -1.34
Rfx1P48377 Gm44374-201ENSMUST00000199821 140 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.71□□□□□ -1.34
Rfx1P48377 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Rfx1P48377 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
Rfx1P48377 AC127371.1-201ENSMUST00000228516 312 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Gm24765-201ENSMUST00000083691 103 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Rfx1P48377 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Rfx1P48377 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Rfx1P48377 Gm37051-201ENSMUST00000194535 2943 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Gm44668-201ENSMUST00000207911 3265 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
Rfx1P48377 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Rfx1P48377 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Rfx1P48377 AC124556.1-201ENSMUST00000218256 1319 ntBASIC6.71□□□□□ -1.34
Rfx1P48377 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Rfx1P48377 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Rfx1P48377 Gm42728-201ENSMUST00000202644 1552 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Rfx1P48377 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Rfx1P48377 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Rfx1P48377 Gm9700-201ENSMUST00000193786 1617 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Rfx1P48377 Gm26144-201ENSMUST00000104475 132 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Rfx1P48377 Gm12653-201ENSMUST00000117778 561 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Gm11843-201ENSMUST00000118984 425 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
Rfx1P48377 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Rfx1P48377 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Rfx1P48377 Gm25013-201ENSMUST00000158402 128 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Gm24741-201ENSMUST00000158857 106 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Rfx1P48377 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Rfx1P48377 Gm26923-201ENSMUST00000182615 996 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Mir7046-201ENSMUST00000183435 66 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Gm5252-201ENSMUST00000189030 909 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Gm28116-201ENSMUST00000189064 387 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Gm42708-201ENSMUST00000196332 905 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Rfx1P48377 Gm44125-201ENSMUST00000203068 448 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Gm44277-201ENSMUST00000205128 649 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.7□□□□□ -1.34
Rfx1P48377 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.7□□□□□ -1.34
Rfx1P48377 Gm29785-201ENSMUST00000217033 383 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Gm20304-201ENSMUST00000218168 444 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC6.7□□□□□ -1.34
Rfx1P48377 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 AC118639.1-204ENSMUST00000226401 694 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 AC125539.2-201ENSMUST00000228339 753 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
Rfx1P48377 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC6.7□□□□□ -1.34
Rfx1P48377 Olfr1193-201ENSMUST00000081697 957 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
Rfx1P48377 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Rfx1P48377 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.7□□□□□ -1.34
Rfx1P48377 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Rfx1P48377 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Rfx1P48377 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Rfx1P48377 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Rfx1P48377 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Rfx1P48377 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Rfx1P48377 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Rfx1P48377 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.7□□□□□ -1.34
Rfx1P48377 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Rfx1P48377 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Rfx1P48377 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC6.69□□□□□ -1.34
Rfx1P48377 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC6.69□□□□□ -1.34
Rfx1P48377 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC6.69□□□□□ -1.34
Rfx1P48377 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Rfx1P48377 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx1P48377 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx1P48377 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Rfx1P48377 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx1P48377 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms