Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.14□□□□□ -1.75
Cdx2P43241 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Cdx2P43241 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.14□□□□□ -1.75
Cdx2P43241 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cdx2P43241 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Cdx2P43241 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cdx2P43241 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cdx2P43241 Gm12173-201ENSMUST00000117622 273 ntBASIC4.14□□□□□ -1.75
Cdx2P43241 Gm12252-201ENSMUST00000119517 219 ntBASIC4.14□□□□□ -1.75
Cdx2P43241 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Cdx2P43241 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.14□□□□□ -1.75
Cdx2P43241 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.14□□□□□ -1.75
Cdx2P43241 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Cdx2P43241 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.14□□□□□ -1.75
Cdx2P43241 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Cdx2P43241 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.14□□□□□ -1.75
Cdx2P43241 Gm25908-201ENSMUST00000157624 98 ntBASIC4.14□□□□□ -1.75
Cdx2P43241 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC4.14□□□□□ -1.75
Cdx2P43241 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.14□□□□□ -1.75
Cdx2P43241 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.14□□□□□ -1.75
Cdx2P43241 Gm43895-201ENSMUST00000203219 855 ntBASIC4.14□□□□□ -1.75
Cdx2P43241 Gm44023-201ENSMUST00000203710 469 ntBASIC4.14□□□□□ -1.75
Cdx2P43241 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.14□□□□□ -1.75
Cdx2P43241 Gm44583-201ENSMUST00000207478 281 ntBASIC4.14□□□□□ -1.75
Cdx2P43241 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Cdx2P43241 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.14□□□□□ -1.75
Cdx2P43241 AC124408.1-201ENSMUST00000228938 707 ntBASIC4.14□□□□□ -1.75
Cdx2P43241 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cdx2P43241 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Cdx2P43241 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.14□□□□□ -1.75
Cdx2P43241 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cdx2P43241 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Cdx2P43241 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cdx2P43241 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cdx2P43241 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cdx2P43241 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cdx2P43241 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Cdx2P43241 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Cdx2P43241 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.13□□□□□ -1.75
Cdx2P43241 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Cdx2P43241 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.13□□□□□ -1.75
Cdx2P43241 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Cdx2P43241 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Cdx2P43241 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
Cdx2P43241 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
Cdx2P43241 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Cdx2P43241 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.13□□□□□ -1.75
Cdx2P43241 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Cdx2P43241 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Cdx2P43241 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
Cdx2P43241 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.13□□□□□ -1.75
Cdx2P43241 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Cdx2P43241 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Cdx2P43241 Gm24788-201ENSMUST00000104283 156 ntBASIC4.13□□□□□ -1.75
Cdx2P43241 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.13□□□□□ -1.75
Cdx2P43241 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.13□□□□□ -1.75
Cdx2P43241 Gm8129-201ENSMUST00000118230 213 ntBASIC4.13□□□□□ -1.75
Cdx2P43241 Gm15916-201ENSMUST00000118355 736 ntBASIC4.13□□□□□ -1.75
Cdx2P43241 Gm14876-201ENSMUST00000120795 327 ntBASIC4.13□□□□□ -1.75
Cdx2P43241 Gm5379-201ENSMUST00000120973 826 ntBASIC4.13□□□□□ -1.75
Cdx2P43241 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.13□□□□□ -1.75
Cdx2P43241 Gm24505-201ENSMUST00000157682 126 ntBASIC4.13□□□□□ -1.75
Cdx2P43241 Gm26036-201ENSMUST00000158149 144 ntBASIC4.13□□□□□ -1.75
Cdx2P43241 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Cdx2P43241 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Cdx2P43241 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.13□□□□□ -1.75
Cdx2P43241 Gm43276-201ENSMUST00000199712 364 ntBASIC4.13□□□□□ -1.75
Cdx2P43241 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Cdx2P43241 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Cdx2P43241 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Cdx2P43241 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC4.13□□□□□ -1.75
Cdx2P43241 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.13□□□□□ -1.75
Cdx2P43241 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC4.13□□□□□ -1.75
Cdx2P43241 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Cdx2P43241 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Cdx2P43241 Mir132-201ENSMUST00000083603 66 ntBASIC4.13□□□□□ -1.75
Cdx2P43241 Mir323-201ENSMUST00000083683 86 ntBASIC4.13□□□□□ -1.75
Cdx2P43241 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Cdx2P43241 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Cdx2P43241 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Cdx2P43241 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Cdx2P43241 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Cdx2P43241 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Cdx2P43241 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Cdx2P43241 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Cdx2P43241 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Cdx2P43241 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx2P43241 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx2P43241 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cdx2P43241 Gm7834-201ENSMUST00000117560 437 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Gm15364-201ENSMUST00000119618 585 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Gm8200-201ENSMUST00000122390 222 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx2P43241 Gm24998-201ENSMUST00000157908 89 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Gm5974-201ENSMUST00000181607 986 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Mir6345-201ENSMUST00000184286 128 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Gm27899-201ENSMUST00000184715 64 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms