Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm23198-201ENSMUST00000158811 91 ntBASIC4.3□□□□□ -1.72
HttP42859 Gm28148-201ENSMUST00000186924 697 ntBASIC4.3□□□□□ -1.72
HttP42859 Gm8035-201ENSMUST00000204625 687 ntBASIC4.3□□□□□ -1.72
HttP42859 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HttP42859 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC4.3□□□□□ -1.72
HttP42859 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HttP42859 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HttP42859 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HttP42859 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HttP42859 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HttP42859 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HttP42859 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HttP42859 Mir105-201ENSMUST00000104655 80 ntBASIC4.3□□□□□ -1.72
HttP42859 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC4.3□□□□□ -1.72
HttP42859 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC4.3□□□□□ -1.72
HttP42859 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.3□□□□□ -1.72
HttP42859 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.3□□□□□ -1.72
HttP42859 AC158605.3-201ENSMUST00000218999 2538 ntBASIC4.3□□□□□ -1.72
HttP42859 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HttP42859 Gm37060-201ENSMUST00000194997 2397 ntBASIC4.29□□□□□ -1.72
HttP42859 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
HttP42859 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HttP42859 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HttP42859 Gm23540-201ENSMUST00000157543 164 ntBASIC4.29□□□□□ -1.72
HttP42859 Gm16545-201ENSMUST00000161968 463 ntBASIC4.29□□□□□ -1.72
HttP42859 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.29□□□□□ -1.72
HttP42859 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.29□□□□□ -1.72
HttP42859 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HttP42859 Gm29072-201ENSMUST00000191149 678 ntBASIC4.29□□□□□ -1.72
HttP42859 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC4.29□□□□□ -1.72
HttP42859 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HttP42859 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HttP42859 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HttP42859 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HttP42859 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HttP42859 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HttP42859 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HttP42859 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HttP42859 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HttP42859 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HttP42859 Gm11645-201ENSMUST00000121589 649 ntBASIC4.29□□□□□ -1.72
HttP42859 Gm20399-201ENSMUST00000174652 132 ntBASIC4.29□□□□□ -1.72
HttP42859 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC4.29□□□□□ -1.72
HttP42859 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC4.29□□□□□ -1.72
HttP42859 Gm4644-201ENSMUST00000197587 400 ntBASIC4.29□□□□□ -1.72
HttP42859 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HttP42859 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.29□□□□□ -1.72
HttP42859 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
HttP42859 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HttP42859 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HttP42859 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HttP42859 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC4.29□□□□□ -1.72
HttP42859 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HttP42859 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.29□□□□□ -1.72
HttP42859 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HttP42859 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HttP42859 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.29□□□□□ -1.72
HttP42859 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC4.29□□□□□ -1.72
HttP42859 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HttP42859 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.28□□□□□ -1.72
HttP42859 Gm18350-201ENSMUST00000187395 955 ntBASIC4.28□□□□□ -1.72
HttP42859 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.28□□□□□ -1.72
HttP42859 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HttP42859 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HttP42859 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HttP42859 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HttP42859 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC4.28□□□□□ -1.72
HttP42859 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HttP42859 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC4.28□□□□□ -1.72
HttP42859 Gm13803-201ENSMUST00000117547 489 ntBASIC4.28□□□□□ -1.72
HttP42859 Gm15613-201ENSMUST00000118396 326 ntBASIC4.28□□□□□ -1.72
HttP42859 Gm6382-201ENSMUST00000118873 942 ntBASIC4.28□□□□□ -1.72
HttP42859 Gm22310-201ENSMUST00000157509 116 ntBASIC4.28□□□□□ -1.72
HttP42859 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC4.28□□□□□ -1.72
HttP42859 Gm44475-201ENSMUST00000204041 424 ntBASIC4.28□□□□□ -1.72
HttP42859 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC4.28□□□□□ -1.72
HttP42859 Gm16419-201ENSMUST00000221057 625 ntBASIC4.28□□□□□ -1.72
HttP42859 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HttP42859 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HttP42859 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HttP42859 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HttP42859 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HttP42859 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HttP42859 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.28□□□□□ -1.72
HttP42859 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.28□□□□□ -1.72
HttP42859 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HttP42859 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC4.28□□□□□ -1.72
HttP42859 Gm18228-201ENSMUST00000217297 1091 ntBASIC4.28□□□□□ -1.72
HttP42859 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.28□□□□□ -1.72
HttP42859 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HttP42859 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC4.27□□□□□ -1.73
HttP42859 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HttP42859 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HttP42859 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.27□□□□□ -1.73
HttP42859 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HttP42859 Gm13785-201ENSMUST00000119099 690 ntBASIC4.27□□□□□ -1.73
HttP42859 Gm13557-201ENSMUST00000120771 382 ntBASIC4.27□□□□□ -1.73
HttP42859 Gm6058-201ENSMUST00000154261 399 ntBASIC4.27□□□□□ -1.73
HttP42859 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.27□□□□□ -1.73
HttP42859 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms