Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm43523-201ENSMUST00000197397 2878 ntBASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Cxcl12P40224 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Cxcl12P40224 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm26418-201ENSMUST00000104275 137 ntBASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm24987-201ENSMUST00000104453 134 ntBASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm11971-201ENSMUST00000117715 288 ntBASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm23499-201ENSMUST00000157736 268 ntBASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC4.47□□□□□ -1.69
Cxcl12P40224 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm37828-201ENSMUST00000192496 432 ntBASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm43855-201ENSMUST00000197462 507 ntBASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm44779-201ENSMUST00000206937 708 ntBASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.47□□□□□ -1.69
Cxcl12P40224 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cxcl12P40224 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC4.47□□□□□ -1.69
Cxcl12P40224 AC162183.1-202ENSMUST00000225434 904 ntBASIC4.47□□□□□ -1.69
Cxcl12P40224 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.47□□□□□ -1.69
Cxcl12P40224 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.47□□□□□ -1.69
Cxcl12P40224 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cxcl12P40224 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cxcl12P40224 Mir34b-201ENSMUST00000083558 84 ntBASIC4.47□□□□□ -1.69
Cxcl12P40224 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cxcl12P40224 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cxcl12P40224 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Cxcl12P40224 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.47□□□□□ -1.69
Cxcl12P40224 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Cxcl12P40224 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Cxcl12P40224 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cxcl12P40224 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.46□□□□□ -1.69
Cxcl12P40224 Gm42492-201ENSMUST00000195780 2915 ntBASIC4.46□□□□□ -1.69
Cxcl12P40224 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Cxcl12P40224 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
Cxcl12P40224 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Cxcl12P40224 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cxcl12P40224 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Cxcl12P40224 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm25764-201ENSMUST00000104092 134 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm23175-201ENSMUST00000104371 132 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm11313-201ENSMUST00000118779 432 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm14687-201ENSMUST00000120206 363 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm3160-201ENSMUST00000128343 607 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm16290-201ENSMUST00000161175 474 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm21999-201ENSMUST00000165985 387 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm23365-201ENSMUST00000175019 125 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm25960-201ENSMUST00000175110 125 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm44453-201ENSMUST00000175161 126 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm25195-201ENSMUST00000177656 126 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm37164-201ENSMUST00000192809 637 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm42983-201ENSMUST00000199879 815 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm43039-201ENSMUST00000202883 963 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm45574-201ENSMUST00000210921 331 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC4.46□□□□□ -1.7
Cxcl12P40224 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cxcl12P40224 Snora7a-201ENSMUST00000082629 140 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cxcl12P40224 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cxcl12P40224 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cxcl12P40224 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.46□□□□□ -1.7
Cxcl12P40224 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cxcl12P40224 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.45□□□□□ -1.7
Cxcl12P40224 Gm37703-201ENSMUST00000192292 1784 ntBASIC4.45□□□□□ -1.7
Cxcl12P40224 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.45□□□□□ -1.7
Cxcl12P40224 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cxcl12P40224 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cxcl12P40224 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cxcl12P40224 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cxcl12P40224 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cxcl12P40224 Gm12820-201ENSMUST00000119233 342 ntBASIC4.45□□□□□ -1.7
Cxcl12P40224 Gm15493-201ENSMUST00000119461 528 ntBASIC4.45□□□□□ -1.7
Cxcl12P40224 Gm13121-201ENSMUST00000120637 632 ntBASIC4.45□□□□□ -1.7
Cxcl12P40224 Gm12103-201ENSMUST00000121892 362 ntBASIC4.45□□□□□ -1.7
Cxcl12P40224 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cxcl12P40224 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.45□□□□□ -1.7
Cxcl12P40224 Gm23958-201ENSMUST00000157207 105 ntBASIC4.45□□□□□ -1.7
Cxcl12P40224 Mir6385-201ENSMUST00000184295 105 ntBASIC4.45□□□□□ -1.7
Cxcl12P40224 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cxcl12P40224 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC4.45□□□□□ -1.7
Cxcl12P40224 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cxcl12P40224 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC4.45□□□□□ -1.7
Cxcl12P40224 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cxcl12P40224 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms