Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
P20040 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
P20040 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
P20040 Gm15168-201ENSMUST00000121057 316 ntBASIC3.98□□□□□ -1.77
P20040 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC3.98□□□□□ -1.77
P20040 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC3.98□□□□□ -1.77
P20040 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC3.98□□□□□ -1.77
P20040 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
P20040 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
P20040 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
P20040 Mir5112-201ENSMUST00000174897 60 ntBASIC3.98□□□□□ -1.77
P20040 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC3.98□□□□□ -1.77
P20040 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC3.98□□□□□ -1.77
P20040 Gm26950-201ENSMUST00000182734 498 ntBASIC3.98□□□□□ -1.77
P20040 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC3.98□□□□□ -1.77
P20040 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
P20040 Gm23925-202ENSMUST00000188429 132 ntBASIC3.98□□□□□ -1.77
P20040 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
P20040 Gm37961-201ENSMUST00000192729 299 ntBASIC3.98□□□□□ -1.77
P20040 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC3.98□□□□□ -1.77
P20040 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC3.98□□□□□ -1.77
P20040 Gm43295-201ENSMUST00000201439 412 ntBASIC3.98□□□□□ -1.77
P20040 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC3.98□□□□□ -1.77
P20040 Gm45610-201ENSMUST00000209227 784 ntBASIC3.98□□□□□ -1.77
P20040 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC3.98□□□□□ -1.77
P20040 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC3.98□□□□□ -1.77
P20040 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC3.98□□□□□ -1.77
P20040 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC3.98□□□□□ -1.77
P20040 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
P20040 Olfr881-201ENSMUST00000074611 948 ntBASIC3.98□□□□□ -1.77
P20040 Gm25140-201ENSMUST00000083254 140 ntBASIC3.98□□□□□ -1.77
P20040 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
P20040 Gm6043-201ENSMUST00000099961 492 ntBASIC3.98□□□□□ -1.77
P20040 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
P20040 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
P20040 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
P20040 Gm14806-201ENSMUST00000116606 2110 ntBASIC3.98□□□□□ -1.77
P20040 Gm42968-201ENSMUST00000198578 1372 ntBASIC3.98□□□□□ -1.77
P20040 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
P20040 Gm38125-201ENSMUST00000194136 3438 ntBASIC3.98□□□□□ -1.77
P20040 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
P20040 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
P20040 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
P20040 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
P20040 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
P20040 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
P20040 Gm23594-201ENSMUST00000104307 134 ntBASIC3.97□□□□□ -1.77
P20040 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC3.97□□□□□ -1.77
P20040 Gm12328-201ENSMUST00000118611 197 ntBASIC3.97□□□□□ -1.77
P20040 Gm13333-201ENSMUST00000119424 781 ntBASIC3.97□□□□□ -1.77
P20040 Gm12231-201ENSMUST00000119447 695 ntBASIC3.97□□□□□ -1.77
P20040 Gm16179-201ENSMUST00000120685 373 ntBASIC3.97□□□□□ -1.77
P20040 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
P20040 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
P20040 Gm24774-201ENSMUST00000157384 134 ntBASIC3.97□□□□□ -1.77
P20040 Gm24113-201ENSMUST00000157477 276 ntBASIC3.97□□□□□ -1.77
P20040 Gm24507-201ENSMUST00000157683 134 ntBASIC3.97□□□□□ -1.77
P20040 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
P20040 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC3.97□□□□□ -1.77
P20040 Gm22646-201ENSMUST00000175130 115 ntBASIC3.97□□□□□ -1.77
P20040 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
P20040 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
P20040 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
P20040 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
P20040 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
P20040 Gm29556-201ENSMUST00000187591 696 ntBASIC3.97□□□□□ -1.77
P20040 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
P20040 Gm38046-201ENSMUST00000192733 550 ntBASIC3.97□□□□□ -1.77
P20040 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC3.97□□□□□ -1.77
P20040 Gm5288-201ENSMUST00000198323 1119 ntBASIC3.97□□□□□ -1.77
P20040 Gm43825-201ENSMUST00000199650 734 ntBASIC3.97□□□□□ -1.77
P20040 Gm44389-201ENSMUST00000203795 182 ntBASIC3.97□□□□□ -1.77
P20040 Gm44138-201ENSMUST00000204939 271 ntBASIC3.97□□□□□ -1.77
P20040 Gm45007-201ENSMUST00000206237 366 ntBASIC3.97□□□□□ -1.77
P20040 AC156832.3-201ENSMUST00000215591 435 ntBASIC3.97□□□□□ -1.77
P20040 Gm18487-201ENSMUST00000215826 878 ntBASIC3.97□□□□□ -1.77
P20040 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC3.97□□□□□ -1.77
P20040 Olfr790-204ENSMUST00000218901 1070 ntBASIC3.97□□□□□ -1.77
P20040 AC132384.6-201ENSMUST00000218976 1206 ntBASIC3.97□□□□□ -1.77
P20040 AC151907.1-201ENSMUST00000228812 412 ntBASIC3.97□□□□□ -1.77
P20040 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
P20040 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
P20040 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
P20040 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
P20040 Mir202-201ENSMUST00000083568 72 ntBASIC3.97□□□□□ -1.77
P20040 Gm22350-201ENSMUST00000083924 156 ntBASIC3.97□□□□□ -1.77
P20040 Gm24031-201ENSMUST00000083930 131 ntBASIC3.97□□□□□ -1.77
P20040 Gm37639-201ENSMUST00000191623 2785 ntBASIC3.97□□□□□ -1.77
P20040 AC156025.1-201ENSMUST00000223597 3551 ntBASIC3.97□□□□□ -1.77
P20040 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
P20040 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
P20040 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
P20040 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
P20040 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
P20040 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
P20040 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
P20040 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
P20040 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
P20040 Gm42704-201ENSMUST00000196875 1778 ntBASIC3.97□□□□□ -1.77
P20040 Gm44860-201ENSMUST00000208473 2346 ntBASIC3.96□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms