Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm26983-201ENSMUST00000182051 388 ntBASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm27875-201ENSMUST00000184425 123 ntBASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Mir6418-201ENSMUST00000185075 115 ntBASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm45359-201ENSMUST00000210635 427 ntBASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm40598-201ENSMUST00000222953 547 ntBASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Chmp6P0C0A3 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm14854-201ENSMUST00000117758 841 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm15603-201ENSMUST00000119252 492 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm24664-201ENSMUST00000158939 100 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm6155-201ENSMUST00000173735 341 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Mir7031-201ENSMUST00000183860 65 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm27457-201ENSMUST00000184771 156 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm29031-201ENSMUST00000185316 614 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm29000-201ENSMUST00000185444 614 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm28204-201ENSMUST00000185934 614 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm28290-201ENSMUST00000186505 614 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm28161-201ENSMUST00000186669 614 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm28749-209ENSMUST00000189599 614 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm33163-201ENSMUST00000194504 614 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm37836-201ENSMUST00000195875 175 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm43922-201ENSMUST00000205071 328 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Chmp6P0C0A3 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm6195-201ENSMUST00000063059 357 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
Chmp6P0C0A3 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Chmp6P0C0A3 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.72□□□□□ -1.65
Chmp6P0C0A3 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Gm13733-201ENSMUST00000117290 535 ntBASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Gm14628-201ENSMUST00000117508 635 ntBASIC4.72□□□□□ -1.65
Chmp6P0C0A3 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Gm25264-201ENSMUST00000158519 117 ntBASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Gm16545-201ENSMUST00000161968 463 ntBASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Gm43037-201ENSMUST00000196808 250 ntBASIC4.72□□□□□ -1.65
Chmp6P0C0A3 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Gm20946-201ENSMUST00000212367 461 ntBASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Gm9616-201ENSMUST00000221154 781 ntBASIC4.72□□□□□ -1.65
Chmp6P0C0A3 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 CT030662.3-201ENSMUST00000228751 476 ntBASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Mir129-2-201ENSMUST00000083577 90 ntBASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.72□□□□□ -1.65
Chmp6P0C0A3 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.71□□□□□ -1.65
Chmp6P0C0A3 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Chmp6P0C0A3 Gm37124-201ENSMUST00000192140 1992 ntBASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm23948-201ENSMUST00000104030 132 ntBASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm23171-201ENSMUST00000157159 264 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms