Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm13924-201ENSMUST00000119899 486 ntBASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm13902-201ENSMUST00000120168 605 ntBASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm22789-201ENSMUST00000157884 130 ntBASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm23198-201ENSMUST00000158811 91 ntBASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm2862-201ENSMUST00000161524 328 ntBASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm6075-201ENSMUST00000186816 486 ntBASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm19908-201ENSMUST00000204684 391 ntBASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Scn1aA2APX8 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Scn1aA2APX8 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm12683-201ENSMUST00000117528 415 ntBASIC4.33□□□□□ -1.72
Scn1aA2APX8 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm14122-201ENSMUST00000122076 973 ntBASIC4.33□□□□□ -1.72
Scn1aA2APX8 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm5924-201ENSMUST00000132554 871 ntBASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm8498-201ENSMUST00000188227 974 ntBASIC4.33□□□□□ -1.72
Scn1aA2APX8 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.33□□□□□ -1.72
Scn1aA2APX8 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Scn1aA2APX8 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.32□□□□□ -1.72
Scn1aA2APX8 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Scn1aA2APX8 Gm13478-201ENSMUST00000118312 413 ntBASIC4.32□□□□□ -1.72
Scn1aA2APX8 Gm15313-201ENSMUST00000119179 282 ntBASIC4.32□□□□□ -1.72
Scn1aA2APX8 Gm14656-201ENSMUST00000120342 502 ntBASIC4.32□□□□□ -1.72
Scn1aA2APX8 Gm12900-201ENSMUST00000120919 573 ntBASIC4.32□□□□□ -1.72
Scn1aA2APX8 Gm26148-201ENSMUST00000157430 68 ntBASIC4.32□□□□□ -1.72
Scn1aA2APX8 Gm25386-201ENSMUST00000157814 288 ntBASIC4.32□□□□□ -1.72
Scn1aA2APX8 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
Scn1aA2APX8 Gm44370-201ENSMUST00000175436 112 ntBASIC4.32□□□□□ -1.72
Scn1aA2APX8 Gm17954-201ENSMUST00000195893 607 ntBASIC4.32□□□□□ -1.72
Scn1aA2APX8 Gm43441-201ENSMUST00000201458 205 ntBASIC4.32□□□□□ -1.72
Scn1aA2APX8 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Scn1aA2APX8 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Scn1aA2APX8 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.32□□□□□ -1.72
Scn1aA2APX8 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.32□□□□□ -1.72
Scn1aA2APX8 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Scn1aA2APX8 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Scn1aA2APX8 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Scn1aA2APX8 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Scn1aA2APX8 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Scn1aA2APX8 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Scn1aA2APX8 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.32□□□□□ -1.72
Scn1aA2APX8 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.32□□□□□ -1.72
Scn1aA2APX8 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Scn1aA2APX8 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Scn1aA2APX8 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Scn1aA2APX8 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.32□□□□□ -1.72
Scn1aA2APX8 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Scn1aA2APX8 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Scn1aA2APX8 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.31□□□□□ -1.72
Scn1aA2APX8 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Gm5060-201ENSMUST00000120072 599 ntBASIC4.31□□□□□ -1.72
Scn1aA2APX8 Gm22204-201ENSMUST00000122654 327 ntBASIC4.31□□□□□ -1.72
Scn1aA2APX8 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Gm28190-201ENSMUST00000189766 722 ntBASIC4.31□□□□□ -1.72
Scn1aA2APX8 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.31□□□□□ -1.72
Scn1aA2APX8 Gm37416-201ENSMUST00000193596 318 ntBASIC4.31□□□□□ -1.72
Scn1aA2APX8 Gm42579-201ENSMUST00000200512 734 ntBASIC4.31□□□□□ -1.72
Scn1aA2APX8 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Gm11262-201ENSMUST00000119326 833 ntBASIC4.31□□□□□ -1.72
Scn1aA2APX8 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.31□□□□□ -1.72
Scn1aA2APX8 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.31□□□□□ -1.72
Scn1aA2APX8 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.31□□□□□ -1.72
Scn1aA2APX8 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.31□□□□□ -1.72
Scn1aA2APX8 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.31□□□□□ -1.72
Scn1aA2APX8 Gm21617-201ENSMUST00000188297 691 ntBASIC4.31□□□□□ -1.72
Scn1aA2APX8 Gm37857-201ENSMUST00000191784 1199 ntBASIC4.31□□□□□ -1.72
Scn1aA2APX8 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Scn1aA2APX8 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.31□□□□□ -1.72
Scn1aA2APX8 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms