Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
H2afb2S4R1M3 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
H2afb2S4R1M3 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm11878-201ENSMUST00000117908 400 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm14576-201ENSMUST00000118073 1111 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm12222-201ENSMUST00000121368 260 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm23467-201ENSMUST00000157127 159 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm22529-201ENSMUST00000158817 123 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm27568-201ENSMUST00000184220 99 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm18728-201ENSMUST00000186155 753 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm2622-201ENSMUST00000200018 471 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm6051-201ENSMUST00000201529 352 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm8703-201ENSMUST00000203793 730 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm44232-201ENSMUST00000204537 225 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm7807-201ENSMUST00000212475 578 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm6195-201ENSMUST00000063059 357 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
H2afb2S4R1M3 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm11633-201ENSMUST00000118176 444 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm13550-201ENSMUST00000118185 525 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm14933-201ENSMUST00000118840 481 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm11866-201ENSMUST00000120209 335 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm4487-201ENSMUST00000150617 442 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm25655-201ENSMUST00000158465 290 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm25048-201ENSMUST00000158598 91 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm15796-201ENSMUST00000162135 204 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm3091-201ENSMUST00000163408 484 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm27254-201ENSMUST00000183926 517 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm27883-201ENSMUST00000183941 102 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm4734-201ENSMUST00000200117 777 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm44757-201ENSMUST00000206373 157 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm44765-201ENSMUST00000206927 601 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm45498-201ENSMUST00000210346 283 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Gm23058-201ENSMUST00000093703 107 ntBASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H2afb2S4R1M3 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm43845-201ENSMUST00000202462 1820 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms