Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Mir7082-201ENSMUST00000183526 92 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Mir6539-201ENSMUST00000183732 110 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm28094-201ENSMUST00000185262 390 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm29641-201ENSMUST00000188955 259 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm29598-201ENSMUST00000188996 588 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm28191-201ENSMUST00000189112 211 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm38131-201ENSMUST00000192449 430 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm37979-201ENSMUST00000193065 712 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm43096-201ENSMUST00000196173 421 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm6543-201ENSMUST00000197353 808 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm42663-201ENSMUST00000199883 351 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm43884-201ENSMUST00000204251 559 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm44058-201ENSMUST00000204335 467 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm29920-201ENSMUST00000206876 754 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm45157-201ENSMUST00000208729 401 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm7639-201ENSMUST00000212608 484 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 CT010480.5-201ENSMUST00000225026 217 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 n-R5s204-201ENSMUST00000082972 119 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Mir20a-201ENSMUST00000083508 107 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm26176-201ENSMUST00000083795 105 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
H2afb3S4R1G7 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm24935-201ENSMUST00000103770 110 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm15094-201ENSMUST00000118394 1131 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm14899-201ENSMUST00000118673 548 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Mup-ps19-201ENSMUST00000120390 519 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm11677-201ENSMUST00000121349 977 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm28211-201ENSMUST00000190920 315 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm37710-201ENSMUST00000193501 1274 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm42502-201ENSMUST00000198550 1089 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm44091-201ENSMUST00000205212 649 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm18414-201ENSMUST00000210858 694 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 AL603630.1-201ENSMUST00000214781 147 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 AC159472.1-201ENSMUST00000218178 463 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm18026-201ENSMUST00000222789 727 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 AV026068-231ENSMUST00000225862 482 ntBASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
H2afb3S4R1G7 Gm25139-201ENSMUST00000083247 210 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms