Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Trem1Q9JKE2 Gm36962-201ENSMUST00000192114 1761 ntBASIC4.09□□□□□ -1.76
Trem1Q9JKE2 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Trem1Q9JKE2 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.09□□□□□ -1.76
Trem1Q9JKE2 Gm26144-201ENSMUST00000104475 132 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm14771-201ENSMUST00000118249 203 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm15803-201ENSMUST00000120118 394 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm25152-201ENSMUST00000157117 114 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm23993-201ENSMUST00000157478 144 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm22210-201ENSMUST00000158101 144 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm25865-201ENSMUST00000158247 104 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm25839-201ENSMUST00000158921 103 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm25971-201ENSMUST00000158953 286 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm10177-201ENSMUST00000160052 444 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Mir6344-201ENSMUST00000183462 104 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm27460-201ENSMUST00000184213 100 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm27286-201ENSMUST00000184934 179 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm4557-201ENSMUST00000185826 907 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm4526-201ENSMUST00000186039 920 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm8708-201ENSMUST00000188500 906 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm37882-201ENSMUST00000195254 196 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm42526-201ENSMUST00000198956 393 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm43501-201ENSMUST00000202513 107 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 AC166358.9-201ENSMUST00000220653 375 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 AC149294.7-201ENSMUST00000227475 1432 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Trem1Q9JKE2 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.08□□□□□ -1.76
Trem1Q9JKE2 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm37303-201ENSMUST00000194202 1559 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm24429-201ENSMUST00000104076 132 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm6134-201ENSMUST00000117265 171 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm15951-201ENSMUST00000118377 400 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm11409-201ENSMUST00000118621 403 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm12294-201ENSMUST00000119723 490 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm8061-201ENSMUST00000122380 350 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Mir1900-201ENSMUST00000122714 78 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm26347-201ENSMUST00000157526 131 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm24435-201ENSMUST00000157886 110 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm24940-201ENSMUST00000158326 108 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm7609-204ENSMUST00000161424 461 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm26460-201ENSMUST00000175061 126 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm27541-201ENSMUST00000184078 122 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Mir6938-201ENSMUST00000184173 63 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms