Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Gm8556-201ENSMUST00000210437 664 ntBASIC4.24□□□□□ -1.73
Lima1Q9ERG0 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Gm22826-201ENSMUST00000083774 165 ntBASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Gm23608-201ENSMUST00000104545 128 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Gm13664-201ENSMUST00000117304 345 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Gm24113-201ENSMUST00000157477 276 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Mir7006-201ENSMUST00000183624 69 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Gm4412-201ENSMUST00000186660 433 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Gm29086-201ENSMUST00000186774 222 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Gm29085-201ENSMUST00000187108 225 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Gm17954-201ENSMUST00000195893 607 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Gm44521-201ENSMUST00000206469 217 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Gm19096-201ENSMUST00000209705 766 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 CT030124.1-201ENSMUST00000217130 235 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Gm46191-201ENSMUST00000218899 433 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 CT025523.1-201ENSMUST00000228318 694 ntBASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Lima1Q9ERG0 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Lima1Q9ERG0 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm42671-201ENSMUST00000198013 1604 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm15021-201ENSMUST00000117832 742 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm11325-201ENSMUST00000119967 469 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm13220-201ENSMUST00000121535 508 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm13745-201ENSMUST00000121994 527 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm20674-201ENSMUST00000177452 369 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm21756-201ENSMUST00000178380 930 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm21405-201ENSMUST00000179024 930 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm28871-201ENSMUST00000186191 687 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm21191-201ENSMUST00000186484 930 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm29503-201ENSMUST00000191044 930 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm8599-201ENSMUST00000193033 457 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm19057-201ENSMUST00000194329 1197 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Lima1Q9ERG0 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Lima1Q9ERG0 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
Lima1Q9ERG0 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
Lima1Q9ERG0 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Lima1Q9ERG0 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.21□□□□□ -1.73
Lima1Q9ERG0 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.21□□□□□ -1.73
Lima1Q9ERG0 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm37114-201ENSMUST00000195065 1804 ntBASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm22530-201ENSMUST00000158820 118 ntBASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms