Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgn3Q9DCB1 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.89□□□□□ -1.79
Hmgn3Q9DCB1 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm22778-201ENSMUST00000104090 128 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm10241-201ENSMUST00000117664 286 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm13550-201ENSMUST00000118185 525 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm11877-201ENSMUST00000118921 852 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm13690-201ENSMUST00000118989 285 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm7421-201ENSMUST00000119298 639 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm7365-201ENSMUST00000120877 639 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm14695-201ENSMUST00000121721 282 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Olfr331-202ENSMUST00000170501 957 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm27690-201ENSMUST00000184596 126 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm18382-201ENSMUST00000194394 582 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm44184-201ENSMUST00000204290 132 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm7128-201ENSMUST00000211639 533 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Supt4b-201ENSMUST00000214434 351 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm23464-201ENSMUST00000083145 147 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgn3Q9DCB1 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm24578-201ENSMUST00000103970 129 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm22020-201ENSMUST00000104358 136 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm13155-201ENSMUST00000119277 646 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Mup-ps18-201ENSMUST00000120145 531 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm8178-201ENSMUST00000121570 646 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm16471-201ENSMUST00000121940 618 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm23753-201ENSMUST00000157575 149 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm26034-201ENSMUST00000158154 116 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm26950-201ENSMUST00000182734 498 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm37300-201ENSMUST00000193327 280 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm44330-201ENSMUST00000200106 143 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm17887-201ENSMUST00000200194 547 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm5418-201ENSMUST00000206932 528 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm8264-201ENSMUST00000217801 465 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm8158-201ENSMUST00000219220 465 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm8112-201ENSMUST00000219637 465 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm18387-201ENSMUST00000220333 702 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm23456-201ENSMUST00000083335 137 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm25581-201ENSMUST00000083410 164 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Mir30b-201ENSMUST00000083542 96 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Hmgn3Q9DCB1 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Hmgn3Q9DCB1 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Hmgn3Q9DCB1 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC3.86□□□□□ -1.79
Hmgn3Q9DCB1 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Hmgn3Q9DCB1 n-R5s82-201ENSMUST00000104213 109 ntBASIC3.86□□□□□ -1.79
Hmgn3Q9DCB1 Gm24160-201ENSMUST00000104594 126 ntBASIC3.86□□□□□ -1.79
Hmgn3Q9DCB1 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Hmgn3Q9DCB1 Gm15994-201ENSMUST00000118029 402 ntBASIC3.86□□□□□ -1.79
Hmgn3Q9DCB1 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC3.86□□□□□ -1.79
Hmgn3Q9DCB1 Gm8244-201ENSMUST00000121254 264 ntBASIC3.86□□□□□ -1.79
Hmgn3Q9DCB1 Gm22988-201ENSMUST00000122759 144 ntBASIC3.86□□□□□ -1.79
Hmgn3Q9DCB1 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.86□□□□□ -1.79
Hmgn3Q9DCB1 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Hmgn3Q9DCB1 Gm17109-201ENSMUST00000163985 358 ntBASIC3.86□□□□□ -1.79
Hmgn3Q9DCB1 V1rg10-201ENSMUST00000183378 937 ntBASIC3.86□□□□□ -1.79
Hmgn3Q9DCB1 Gm5058-201ENSMUST00000187331 463 ntBASIC3.86□□□□□ -1.79
Hmgn3Q9DCB1 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms