Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 AC152951.1-201ENSMUST00000218907 266 ntBASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 AC192616.3-201ENSMUST00000220797 1124 ntBASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 AC160958.1-201ENSMUST00000224833 368 ntBASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 AC102542.1-201ENSMUST00000225204 1138 ntBASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Nsa2-203ENSMUST00000225410 974 ntBASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ddx56Q9D0R4 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm6664-201ENSMUST00000119138 468 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm5943-201ENSMUST00000119458 459 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm15452-201ENSMUST00000119877 240 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm11677-201ENSMUST00000121349 977 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm23354-201ENSMUST00000158426 104 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm16490-201ENSMUST00000165299 351 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm19203-201ENSMUST00000174049 939 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Mir3097-201ENSMUST00000175356 67 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm27960-201ENSMUST00000183445 184 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm27428-201ENSMUST00000184289 110 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm29284-201ENSMUST00000188363 255 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm37243-201ENSMUST00000193407 595 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm43104-201ENSMUST00000197234 311 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm18944-201ENSMUST00000207672 643 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm45727-201ENSMUST00000212886 572 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm8911-201ENSMUST00000213986 652 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 AC091260.1-201ENSMUST00000216112 229 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm29785-201ENSMUST00000217033 383 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm8675-201ENSMUST00000201408 1856 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Gm42728-201ENSMUST00000202644 1552 ntBASIC5.55□□□□□ -1.52
Ddx56Q9D0R4 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Gm13340-201ENSMUST00000117219 1545 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Gm7974-201ENSMUST00000117154 408 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Gm12074-201ENSMUST00000120189 219 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms