Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm4202-201ENSMUST00000169025 733 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm26866-201ENSMUST00000180414 802 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm29592-201ENSMUST00000189434 370 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm28408-201ENSMUST00000191557 463 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm5886-202ENSMUST00000203957 522 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm2628-201ENSMUST00000218019 426 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm19599-201ENSMUST00000218898 358 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm23975-201ENSMUST00000082685 106 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm10205-201ENSMUST00000087431 234 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm29486-201ENSMUST00000088648 372 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm17165-201ENSMUST00000096155 493 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.49□□□□□ -1.53
Trim13Q9CYB0 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim13Q9CYB0 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm43092-201ENSMUST00000202986 1854 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm14896-201ENSMUST00000121311 1351 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Mir804-201ENSMUST00000103251 95 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm7485-201ENSMUST00000119502 1109 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm22383-201ENSMUST00000158188 327 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm24682-201ENSMUST00000158764 137 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm23473-201ENSMUST00000158883 116 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm16298-201ENSMUST00000161107 420 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm20454-201ENSMUST00000172713 221 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm20656-201ENSMUST00000176925 518 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm27804-201ENSMUST00000185135 119 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm2979-201ENSMUST00000193442 463 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm37375-201ENSMUST00000193859 387 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm37385-201ENSMUST00000195223 387 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm37358-201ENSMUST00000195492 479 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm43516-201ENSMUST00000196891 322 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm42776-201ENSMUST00000198031 406 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm43849-201ENSMUST00000201086 215 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm43798-201ENSMUST00000202056 394 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm44161-201ENSMUST00000203532 253 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm7045-201ENSMUST00000221466 605 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Gm17915-201ENSMUST00000222077 548 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 AC107663.1-201ENSMUST00000224257 468 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 AC122341.1-201ENSMUST00000227291 560 ntBASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim13Q9CYB0 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms