Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.14□□□□□ -1.59
Smc1aQ9CU62 AC154198.1-201ENSMUST00000222839 424 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 AC139294.1-201ENSMUST00000226708 571 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gm14107-201ENSMUST00000117774 330 ntBASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gm8475-201ENSMUST00000118211 526 ntBASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gm12423-201ENSMUST00000118334 135 ntBASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gm14688-201ENSMUST00000119169 303 ntBASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gm13508-201ENSMUST00000121639 775 ntBASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gm19427-201ENSMUST00000183619 208 ntBASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gm27864-201ENSMUST00000183704 190 ntBASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Mir7022-201ENSMUST00000183749 61 ntBASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gm36985-201ENSMUST00000195595 379 ntBASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gm44816-201ENSMUST00000206666 477 ntBASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gm45209-201ENSMUST00000207122 353 ntBASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gm46138-201ENSMUST00000215294 426 ntBASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.13□□□□□ -1.59
Smc1aQ9CU62 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 n-R5s85-201ENSMUST00000083453 113 ntBASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC5.13□□□□□ -1.59
Smc1aQ9CU62 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm13220-201ENSMUST00000121535 508 ntBASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm18128-201ENSMUST00000172625 511 ntBASIC5.12□□□□□ -1.59
Smc1aQ9CU62 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm27834-201ENSMUST00000183427 125 ntBASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm27568-201ENSMUST00000184220 99 ntBASIC5.12□□□□□ -1.59
Smc1aQ9CU62 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm29097-201ENSMUST00000190273 422 ntBASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm44234-201ENSMUST00000204246 900 ntBASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm44138-201ENSMUST00000204939 271 ntBASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm6065-201ENSMUST00000081336 492 ntBASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm24917-201ENSMUST00000083935 104 ntBASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Smc1aQ9CU62 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Gm23014-201ENSMUST00000104144 130 ntBASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Gm11385-201ENSMUST00000121513 570 ntBASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Gm12041-201ENSMUST00000121606 602 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms