Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 AC153800.1-201ENSMUST00000219212 365 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 AC167013.2-202ENSMUST00000227035 333 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm23626-201ENSMUST00000082458 133 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm22423-201ENSMUST00000082861 184 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm22370-201ENSMUST00000102422 83 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm12387-201ENSMUST00000118573 955 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm14175-201ENSMUST00000119835 241 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm15212-201ENSMUST00000122403 466 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm6969-201ENSMUST00000140065 342 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm18522-201ENSMUST00000173947 650 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm28500-201ENSMUST00000190286 151 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm43309-201ENSMUST00000200837 458 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm45392-201ENSMUST00000210441 214 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 AC132384.6-201ENSMUST00000218976 1206 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm3213-201ENSMUST00000219296 441 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Gm6049-201ENSMUST00000222369 458 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Use1Q9CQ56 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.19□□□□□ -1.74
Use1Q9CQ56 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Use1Q9CQ56 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Use1Q9CQ56 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Use1Q9CQ56 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm15361-201ENSMUST00000119320 444 ntBASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm15171-201ENSMUST00000122191 334 ntBASIC4.18□□□□□ -1.74
Use1Q9CQ56 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm8988-201ENSMUST00000155015 1240 ntBASIC4.18□□□□□ -1.74
Use1Q9CQ56 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Use1Q9CQ56 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm6650-201ENSMUST00000166710 614 ntBASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC4.18□□□□□ -1.74
Use1Q9CQ56 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm28263-201ENSMUST00000185884 400 ntBASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm29036-201ENSMUST00000189967 877 ntBASIC4.18□□□□□ -1.74
Use1Q9CQ56 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm43586-201ENSMUST00000195948 310 ntBASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm45689-201ENSMUST00000210522 133 ntBASIC4.18□□□□□ -1.74
Use1Q9CQ56 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.18□□□□□ -1.74
Use1Q9CQ56 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.18□□□□□ -1.74
Use1Q9CQ56 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.18□□□□□ -1.74
Use1Q9CQ56 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.18□□□□□ -1.74
Use1Q9CQ56 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm22971-201ENSMUST00000083305 97 ntBASIC4.18□□□□□ -1.74
Use1Q9CQ56 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Use1Q9CQ56 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms