Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.2□□□□□ -1.58
CopaQ8CIE6 AC116395.1-201ENSMUST00000225480 1143 ntBASIC5.2□□□□□ -1.58
CopaQ8CIE6 AC140368.1-202ENSMUST00000226131 658 ntBASIC5.2□□□□□ -1.58
CopaQ8CIE6 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CopaQ8CIE6 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CopaQ8CIE6 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CopaQ8CIE6 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CopaQ8CIE6 Gm25134-201ENSMUST00000082646 160 ntBASIC5.2□□□□□ -1.58
CopaQ8CIE6 Gm25131-201ENSMUST00000082653 151 ntBASIC5.2□□□□□ -1.58
CopaQ8CIE6 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.2□□□□□ -1.58
CopaQ8CIE6 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CopaQ8CIE6 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CopaQ8CIE6 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CopaQ8CIE6 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.2□□□□□ -1.58
CopaQ8CIE6 Smc5-206ENSMUST00000226111 3265 ntBASIC5.2□□□□□ -1.58
CopaQ8CIE6 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CopaQ8CIE6 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.2□□□□□ -1.58
CopaQ8CIE6 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CopaQ8CIE6 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm42967-201ENSMUST00000198647 2312 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm12641-201ENSMUST00000117874 985 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm7421-201ENSMUST00000119298 639 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm7365-201ENSMUST00000120877 639 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm13471-201ENSMUST00000122057 433 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm15022-201ENSMUST00000122074 746 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm7973-201ENSMUST00000122107 488 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm4540-201ENSMUST00000170669 429 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm9587-201ENSMUST00000172449 454 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Mir6238-201ENSMUST00000184140 129 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm9443-201ENSMUST00000188406 816 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm37578-201ENSMUST00000192256 1177 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm37445-201ENSMUST00000195318 242 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm44074-201ENSMUST00000204562 337 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm44820-201ENSMUST00000207420 396 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm18924-201ENSMUST00000211929 316 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Olfr790-204ENSMUST00000218901 1070 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 AC152979.4-201ENSMUST00000219893 379 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm3333-202ENSMUST00000221763 1044 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Mir342-201ENSMUST00000083502 99 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm22578-201ENSMUST00000083730 107 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.19□□□□□ -1.58
CopaQ8CIE6 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.19□□□□□ -1.58
CopaQ8CIE6 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CopaQ8CIE6 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.18□□□□□ -1.58
CopaQ8CIE6 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CopaQ8CIE6 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CopaQ8CIE6 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CopaQ8CIE6 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CopaQ8CIE6 Mup-ps14-201ENSMUST00000118437 532 ntBASIC5.18□□□□□ -1.58
CopaQ8CIE6 Gm7312-201ENSMUST00000118798 469 ntBASIC5.18□□□□□ -1.58
CopaQ8CIE6 Mup-ps10-201ENSMUST00000119626 556 ntBASIC5.18□□□□□ -1.58
CopaQ8CIE6 Gm11742-201ENSMUST00000119903 233 ntBASIC5.18□□□□□ -1.58
CopaQ8CIE6 Gm14600-201ENSMUST00000121032 630 ntBASIC5.18□□□□□ -1.58
CopaQ8CIE6 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.18□□□□□ -1.58
CopaQ8CIE6 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.18□□□□□ -1.58
CopaQ8CIE6 Gm15367-201ENSMUST00000122398 1016 ntBASIC5.18□□□□□ -1.58
CopaQ8CIE6 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.18□□□□□ -1.58
CopaQ8CIE6 Gm25290-201ENSMUST00000122796 144 ntBASIC5.18□□□□□ -1.58
CopaQ8CIE6 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
CopaQ8CIE6 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CopaQ8CIE6 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CopaQ8CIE6 Gm22804-201ENSMUST00000158052 101 ntBASIC5.18□□□□□ -1.58
CopaQ8CIE6 Gm25865-201ENSMUST00000158247 104 ntBASIC5.18□□□□□ -1.58
CopaQ8CIE6 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CopaQ8CIE6 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC5.18□□□□□ -1.58
CopaQ8CIE6 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms