Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.89□□□□□ -1.47
Brf1Q8CFK2 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Brf1Q8CFK2 Gm42967-201ENSMUST00000198647 2312 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm14575-201ENSMUST00000117210 560 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm12520-201ENSMUST00000117493 316 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm13815-201ENSMUST00000119963 412 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm14986-201ENSMUST00000121262 1002 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm22794-201ENSMUST00000157228 306 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm25383-201ENSMUST00000157810 144 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm22326-201ENSMUST00000158897 351 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm3221-201ENSMUST00000164869 440 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm23145-201ENSMUST00000178912 79 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm2053-201ENSMUST00000195671 631 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm35212-201ENSMUST00000196672 606 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm43368-201ENSMUST00000200638 409 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm44184-201ENSMUST00000204290 132 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm45189-201ENSMUST00000208567 363 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 AC159472.1-201ENSMUST00000218178 463 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm24707-201ENSMUST00000082812 107 ntBASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Brf1Q8CFK2 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm17132-201ENSMUST00000109542 1158 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm12230-201ENSMUST00000118301 454 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm12387-201ENSMUST00000118573 955 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm15981-201ENSMUST00000119196 457 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm13213-201ENSMUST00000119668 474 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm25714-201ENSMUST00000158626 296 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm6647-201ENSMUST00000170514 641 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm8214-201ENSMUST00000172123 351 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm22252-201ENSMUST00000179316 79 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Mir669a-7-201ENSMUST00000180364 87 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Mir669a-6-201ENSMUST00000196127 87 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm21006-201ENSMUST00000196930 667 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Mir669a-12-201ENSMUST00000197274 87 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Mir669a-5-201ENSMUST00000197439 87 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Mir669a-10-201ENSMUST00000197745 87 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Mir669a-11-201ENSMUST00000197952 87 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Mir669a-4-201ENSMUST00000198665 87 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Mir669a-9-201ENSMUST00000200087 87 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Mir669a-8-201ENSMUST00000200268 87 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm45185-201ENSMUST00000207556 404 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm18850-201ENSMUST00000211578 388 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm34005-201ENSMUST00000215834 282 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm23628-201ENSMUST00000082464 173 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Mir342-201ENSMUST00000083502 99 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Mir338-201ENSMUST00000083666 98 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms