Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc28bQ8CEG5 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.48□□□□□ -1.69
Ccdc28bQ8CEG5 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm3943-201ENSMUST00000118606 718 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm15785-201ENSMUST00000119145 694 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm11822-201ENSMUST00000119177 415 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm26487-201ENSMUST00000158022 94 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm24854-201ENSMUST00000158025 98 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm5558-201ENSMUST00000178933 495 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm27039-201ENSMUST00000182438 962 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm43586-201ENSMUST00000195948 310 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm44402-201ENSMUST00000203677 238 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm7825-201ENSMUST00000204046 416 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm46192-201ENSMUST00000217894 326 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Platr25-208ENSMUST00000222602 939 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 AC192333.6-201ENSMUST00000224565 725 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm6043-201ENSMUST00000099961 492 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm6300-201ENSMUST00000192393 1498 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.47□□□□□ -1.69
Ccdc28bQ8CEG5 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Ccdc28bQ8CEG5 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.46□□□□□ -1.69
Ccdc28bQ8CEG5 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Ccdc28bQ8CEG5 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
Ccdc28bQ8CEG5 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
Ccdc28bQ8CEG5 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm23709-201ENSMUST00000104364 130 ntBASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm26474-201ENSMUST00000116762 122 ntBASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm13815-201ENSMUST00000119963 412 ntBASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm29513-201ENSMUST00000185741 202 ntBASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm37837-201ENSMUST00000191743 604 ntBASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm44615-201ENSMUST00000206548 358 ntBASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm45608-201ENSMUST00000210948 389 ntBASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm4928-201ENSMUST00000219622 850 ntBASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 Gm3800-201ENSMUST00000221086 554 ntBASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 AC134335.1-201ENSMUST00000227626 329 ntBASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 AC140209.1-201ENSMUST00000227875 284 ntBASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 AC154692.1-201ENSMUST00000228314 544 ntBASIC4.46□□□□□ -1.7
Ccdc28bQ8CEG5 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms