Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm15361-201ENSMUST00000119320 444 ntBASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Gm22314-201ENSMUST00000158007 281 ntBASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Gm36259-201ENSMUST00000197340 392 ntBASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.33□□□□□ -1.72
Trub1Q8C0D0 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Gm44604-201ENSMUST00000205475 496 ntBASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.33□□□□□ -1.72
Trub1Q8C0D0 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 AC110816.1-201ENSMUST00000218559 980 ntBASIC4.33□□□□□ -1.72
Trub1Q8C0D0 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Gm25908-201ENSMUST00000157624 98 ntBASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Mir6537-201ENSMUST00000184150 110 ntBASIC4.32□□□□□ -1.72
Trub1Q8C0D0 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Gm19104-201ENSMUST00000198392 679 ntBASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Gm23928-201ENSMUST00000082469 145 ntBASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Gm7381-201ENSMUST00000098958 300 ntBASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trub1Q8C0D0 Gm4991-201ENSMUST00000118899 1552 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm13478-201ENSMUST00000118312 413 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm12988-201ENSMUST00000119054 478 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm14688-201ENSMUST00000119169 303 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm26312-201ENSMUST00000157769 165 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm22361-201ENSMUST00000158435 176 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm16558-201ENSMUST00000163015 532 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm6155-201ENSMUST00000173735 341 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm27190-201ENSMUST00000184890 542 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm2950-201ENSMUST00000185530 520 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm28263-201ENSMUST00000185884 400 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm18728-201ENSMUST00000186155 753 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm18183-201ENSMUST00000191024 615 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm17887-201ENSMUST00000200194 547 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Gm19366-201ENSMUST00000206996 156 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 CT030124.1-201ENSMUST00000217130 235 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trub1Q8C0D0 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms