Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Gm43341-201ENSMUST00000200104 1308 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Gm24067-201ENSMUST00000104514 85 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Gm15560-201ENSMUST00000117107 643 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Gm15923-201ENSMUST00000119300 1169 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Gm16060-201ENSMUST00000153140 478 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Gm15275-201ENSMUST00000154752 347 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Gm25665-201ENSMUST00000157695 110 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Gm35702-201ENSMUST00000198653 511 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Gm18791-201ENSMUST00000204611 726 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Gm44032-201ENSMUST00000204841 166 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim58Q5NCC9 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 CT025523.1-201ENSMUST00000228318 694 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Gm23099-201ENSMUST00000083454 139 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Gm7381-201ENSMUST00000098958 300 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim58Q5NCC9 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim58Q5NCC9 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Gm12931-201ENSMUST00000117046 324 ntBASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Gm14610-201ENSMUST00000118358 966 ntBASIC5.31□□□□□ -1.56
Trim58Q5NCC9 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Klra14-ps-201ENSMUST00000119532 802 ntBASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Gm25908-201ENSMUST00000157624 98 ntBASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Gm24898-201ENSMUST00000158133 106 ntBASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Gm26983-201ENSMUST00000182051 388 ntBASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Gm42830-201ENSMUST00000196642 313 ntBASIC5.31□□□□□ -1.56
Trim58Q5NCC9 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trim58Q5NCC9 AC134864.1-201ENSMUST00000226326 511 ntBASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Gm37412-201ENSMUST00000194866 4321 ntBASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim58Q5NCC9 Gm43010-201ENSMUST00000195993 2878 ntBASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Gm14710-201ENSMUST00000146082 1066 ntBASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Gm24444-201ENSMUST00000157244 308 ntBASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Gm3084-201ENSMUST00000169967 598 ntBASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Gm43491-201ENSMUST00000197133 784 ntBASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.3□□□□□ -1.56
Trim58Q5NCC9 AC154738.2-201ENSMUST00000227403 1110 ntBASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Gm23928-201ENSMUST00000082469 145 ntBASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Gm44286-201ENSMUST00000204098 1487 ntBASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Gm37011-201ENSMUST00000195543 2935 ntBASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim58Q5NCC9 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 AC134596.1-201ENSMUST00000222016 1922 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm43844-201ENSMUST00000202926 5605 ntBASIC5.29□□□□□ -1.56
Trim58Q5NCC9 Gm23322-201ENSMUST00000104464 167 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms