Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm22710-201ENSMUST00000116892 125 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm14050-201ENSMUST00000117052 346 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm12308-201ENSMUST00000120440 389 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm25383-201ENSMUST00000157810 144 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm8207-201ENSMUST00000171204 502 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm25314-201ENSMUST00000178810 79 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm24863-201ENSMUST00000179499 107 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Mir6899-201ENSMUST00000184798 64 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm19029-201ENSMUST00000189923 564 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm37235-201ENSMUST00000195171 59 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm18696-201ENSMUST00000220103 274 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 AC159208.1-201ENSMUST00000221403 649 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 AC192088.3-201ENSMUST00000227858 831 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Clec2j-201ENSMUST00000032517 515 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm5229-201ENSMUST00000039375 354 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm22169-201ENSMUST00000083229 107 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Trim41Q5NCC3 AC160029.1-201ENSMUST00000219628 2678 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm43031-201ENSMUST00000198500 1887 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 AC107742.1-201ENSMUST00000227769 1390 ntBASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim41Q5NCC3 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Gm37776-201ENSMUST00000193471 2497 ntBASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Gm27660-201ENSMUST00000184028 208 ntBASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Gm43744-201ENSMUST00000196387 688 ntBASIC10.62□□□□□ -0.71
Trim41Q5NCC3 AC105407.3-201ENSMUST00000224161 648 ntBASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trim41Q5NCC3 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim41Q5NCC3 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Gm28874-201ENSMUST00000190917 3134 ntBASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim41Q5NCC3 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Gm5809-201ENSMUST00000121854 529 ntBASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Gm23792-201ENSMUST00000122557 93 ntBASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Gm6081-201ENSMUST00000134472 489 ntBASIC10.61□□□□□ -0.71
Trim41Q5NCC3 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Gm3362-201ENSMUST00000148102 466 ntBASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Gm26372-201ENSMUST00000157831 236 ntBASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Gm25489-201ENSMUST00000158727 141 ntBASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Mirt2-201ENSMUST00000175179 285 ntBASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Gm22367-201ENSMUST00000178930 132 ntBASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Gm28188-201ENSMUST00000190483 236 ntBASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Gm4734-201ENSMUST00000200117 777 ntBASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Gm44870-201ENSMUST00000207291 357 ntBASIC10.61□□□□□ -0.71
Trim41Q5NCC3 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC10.61□□□□□ -0.71
Trim41Q5NCC3 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trim41Q5NCC3 AC134860.6-201ENSMUST00000226038 285 ntBASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Gm5830-201ENSMUST00000049117 443 ntBASIC10.61□□□□□ -0.71
Trim41Q5NCC3 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Gm43953-201ENSMUST00000203709 2867 ntBASIC10.61□□□□□ -0.71
Trim41Q5NCC3 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trim41Q5NCC3 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trim41Q5NCC3 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim41Q5NCC3 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trim41Q5NCC3 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC10.6□□□□□ -0.71
Trim41Q5NCC3 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim41Q5NCC3 Gm10845-202ENSMUST00000228217 3389 ntBASIC10.6□□□□□ -0.71
Trim41Q5NCC3 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trim41Q5NCC3 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim41Q5NCC3 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim41Q5NCC3 Gm11561-201ENSMUST00000117429 417 ntBASIC10.6□□□□□ -0.71
Trim41Q5NCC3 Gm14605-201ENSMUST00000120599 268 ntBASIC10.6□□□□□ -0.71
Trim41Q5NCC3 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC10.6□□□□□ -0.71
Trim41Q5NCC3 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trim41Q5NCC3 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC10.6□□□□□ -0.71
Trim41Q5NCC3 Mir5125-201ENSMUST00000175240 79 ntBASIC10.6□□□□□ -0.71
Trim41Q5NCC3 Gm22584-201ENSMUST00000177935 92 ntBASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms