Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm29774-201ENSMUST00000219270 436 ntBASIC5.34□□□□□ -1.56
Shank3Q4ACU6 AC130673.2-201ENSMUST00000228091 797 ntBASIC5.34□□□□□ -1.56
Shank3Q4ACU6 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.56
Shank3Q4ACU6 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Shank3Q4ACU6 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Shank3Q4ACU6 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Shank3Q4ACU6 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Gm19176-201ENSMUST00000222149 1831 ntBASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Gm24831-201ENSMUST00000116778 126 ntBASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Gm11718-201ENSMUST00000119942 537 ntBASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Gm11398-201ENSMUST00000120330 320 ntBASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Gm22314-201ENSMUST00000158007 281 ntBASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Gm26036-201ENSMUST00000158149 144 ntBASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Gm37241-201ENSMUST00000191736 523 ntBASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Gm45553-201ENSMUST00000209929 507 ntBASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Gm8288-201ENSMUST00000223406 593 ntBASIC5.33□□□□□ -1.56
Shank3Q4ACU6 AC126275.2-201ENSMUST00000225224 253 ntBASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Shank3Q4ACU6 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 AC158938.1-201ENSMUST00000225372 6720 ntBASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Gm29598-201ENSMUST00000188996 588 ntBASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Gm43015-201ENSMUST00000199087 565 ntBASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Gm8745-201ENSMUST00000207846 782 ntBASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Shank3Q4ACU6 Gm5974-201ENSMUST00000181607 986 ntBASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 AC166263.1-201ENSMUST00000218586 238 ntBASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Gm9911-201ENSMUST00000211467 2802 ntBASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Gm37236-201ENSMUST00000193670 3249 ntBASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Gm45137-201ENSMUST00000208652 4415 ntBASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Gm13785-201ENSMUST00000119099 690 ntBASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Gm11255-201ENSMUST00000120448 1180 ntBASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Mup-ps20-201ENSMUST00000121132 389 ntBASIC5.31□□□□□ -1.56
Shank3Q4ACU6 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 380.7 ms