Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.73
Trim40Q3UWA4 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.28□□□□□ -1.73
Trim40Q3UWA4 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm24230-201ENSMUST00000104313 129 ntBASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm14304-201ENSMUST00000117272 446 ntBASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm14521-201ENSMUST00000119545 350 ntBASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm15194-201ENSMUST00000120453 434 ntBASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm26169-201ENSMUST00000158420 135 ntBASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm6647-201ENSMUST00000170514 641 ntBASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm38018-201ENSMUST00000195651 540 ntBASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm7825-201ENSMUST00000204046 416 ntBASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm44972-201ENSMUST00000206419 406 ntBASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm44816-201ENSMUST00000206666 477 ntBASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm5655-201ENSMUST00000221078 901 ntBASIC4.27□□□□□ -1.73
Trim40Q3UWA4 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim40Q3UWA4 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm15018-201ENSMUST00000117090 633 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm23225-201ENSMUST00000158121 114 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm23450-201ENSMUST00000178285 91 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm3489-201ENSMUST00000190083 528 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm42830-201ENSMUST00000196642 313 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm31532-201ENSMUST00000203555 767 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm19366-201ENSMUST00000206996 156 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm10297-201ENSMUST00000207136 651 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 AC153975.1-201ENSMUST00000220087 926 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 AC140209.1-201ENSMUST00000227875 284 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Clec2j-201ENSMUST00000032517 515 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm22423-201ENSMUST00000082861 184 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim40Q3UWA4 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms