Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm10241-201ENSMUST00000117664 286 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm12427-201ENSMUST00000117719 302 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm13755-201ENSMUST00000118509 305 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm14791-201ENSMUST00000119061 1166 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm12486-201ENSMUST00000120887 541 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm13973-201ENSMUST00000121371 894 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm22986-201ENSMUST00000122753 130 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm22816-201ENSMUST00000157450 117 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Mir5710-201ENSMUST00000176884 69 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm37050-201ENSMUST00000193464 466 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm4501-201ENSMUST00000207330 551 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm4558-201ENSMUST00000207886 521 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 AC124356.2-201ENSMUST00000221874 336 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 AC132260.2-201ENSMUST00000224482 344 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm10042-201ENSMUST00000079884 78 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Upf3aQ3ULJ3 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
Upf3aQ3ULJ3 Gm18422-202ENSMUST00000203798 2214 ntBASIC4.65□□□□□ -1.66
Upf3aQ3ULJ3 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Upf3aQ3ULJ3 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Upf3aQ3ULJ3 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Upf3aQ3ULJ3 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Upf3aQ3ULJ3 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Upf3aQ3ULJ3 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 Gm13550-201ENSMUST00000118185 525 ntBASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 Gm23228-201ENSMUST00000157296 270 ntBASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 Gm27695-201ENSMUST00000184301 91 ntBASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 Gm37720-201ENSMUST00000195497 1241 ntBASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Upf3aQ3ULJ3 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Gm23746-201ENSMUST00000104229 125 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Gm8282-201ENSMUST00000187559 483 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Gm29668-201ENSMUST00000187802 315 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Gm38201-201ENSMUST00000192143 387 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Gm8790-201ENSMUST00000194108 322 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Gm43596-201ENSMUST00000202818 884 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms