Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trafd1Q3UDK1 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.41□□□□□ -1.7
Trafd1Q3UDK1 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trafd1Q3UDK1 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.41□□□□□ -1.7
Trafd1Q3UDK1 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.41□□□□□ -1.7
Trafd1Q3UDK1 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trafd1Q3UDK1 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trafd1Q3UDK1 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Trafd1Q3UDK1 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.7
Trafd1Q3UDK1 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Trafd1Q3UDK1 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Trafd1Q3UDK1 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Trafd1Q3UDK1 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Trafd1Q3UDK1 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm13785-201ENSMUST00000119099 690 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm14788-201ENSMUST00000119457 375 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm15780-201ENSMUST00000121283 935 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm14303-201ENSMUST00000121320 171 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm15212-201ENSMUST00000122403 466 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm37961-201ENSMUST00000192729 299 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm43856-201ENSMUST00000197004 369 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm42999-201ENSMUST00000198049 786 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm20177-201ENSMUST00000203705 334 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm39197-201ENSMUST00000212069 457 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm45789-201ENSMUST00000213038 364 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm18510-201ENSMUST00000219335 1096 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm10115-201ENSMUST00000076071 1228 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm22971-201ENSMUST00000083305 97 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Gm22177-201ENSMUST00000175002 158 ntBASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Gm27568-201ENSMUST00000184220 99 ntBASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Gm27564-201ENSMUST00000185196 96 ntBASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Gm18382-201ENSMUST00000194394 582 ntBASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Gm42566-201ENSMUST00000197120 643 ntBASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Gm44559-201ENSMUST00000207177 1012 ntBASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Gm45608-201ENSMUST00000210948 389 ntBASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trafd1Q3UDK1 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trafd1Q3UDK1 Gm12112-201ENSMUST00000117772 231 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms