Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm14415-201ENSMUST00000118260 1578 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm14512-201ENSMUST00000117924 230 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm4989-201ENSMUST00000118711 749 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm15493-201ENSMUST00000119461 528 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm13007-201ENSMUST00000121866 365 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm9785-202ENSMUST00000144563 593 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm23025-201ENSMUST00000158769 111 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm6647-201ENSMUST00000170514 641 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm20519-201ENSMUST00000173684 359 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm22917-201ENSMUST00000180116 110 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm29284-201ENSMUST00000188363 255 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm29454-201ENSMUST00000190805 393 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm37070-201ENSMUST00000193272 460 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm35648-201ENSMUST00000202304 475 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm17893-201ENSMUST00000203017 770 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm44654-201ENSMUST00000208052 329 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm19232-201ENSMUST00000211621 652 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm18729-201ENSMUST00000217230 621 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm8264-201ENSMUST00000217801 465 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 AC160114.1-201ENSMUST00000221930 365 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 AC159619.2-201ENSMUST00000222924 401 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm8288-201ENSMUST00000223406 593 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 CT009733.1-201ENSMUST00000225322 425 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Mir134-201ENSMUST00000083492 71 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm43498-201ENSMUST00000202002 1486 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp39Q3TIX9 Gm13310-201ENSMUST00000120962 1381 ntBASIC5.17□□□□□ -1.58
Usp39Q3TIX9 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Gm24265-201ENSMUST00000101833 141 ntBASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Gm9429-201ENSMUST00000117804 868 ntBASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Gm14600-201ENSMUST00000121032 630 ntBASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Gm15388-201ENSMUST00000121578 726 ntBASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Gm25824-201ENSMUST00000157092 121 ntBASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Mir1970-201ENSMUST00000157839 104 ntBASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Gm25553-201ENSMUST00000158076 79 ntBASIC5.17□□□□□ -1.58
Usp39Q3TIX9 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Gm7335-201ENSMUST00000172475 373 ntBASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Gm22122-201ENSMUST00000175147 200 ntBASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Gm20612-201ENSMUST00000176318 236 ntBASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Gm24407-201ENSMUST00000177864 141 ntBASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Usp39Q3TIX9 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.17□□□□□ -1.58
Usp39Q3TIX9 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms