Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
SgcbP82349 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SgcbP82349 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SgcbP82349 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SgcbP82349 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SgcbP82349 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SgcbP82349 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
SgcbP82349 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SgcbP82349 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SgcbP82349 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SgcbP82349 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC5.49□□□□□ -1.53
SgcbP82349 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SgcbP82349 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.49□□□□□ -1.53
SgcbP82349 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SgcbP82349 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SgcbP82349 Gm13772-201ENSMUST00000118431 317 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm14736-201ENSMUST00000121470 336 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm15618-201ENSMUST00000121610 452 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm22276-201ENSMUST00000122469 129 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.49□□□□□ -1.53
SgcbP82349 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.49□□□□□ -1.53
SgcbP82349 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.49□□□□□ -1.53
SgcbP82349 Gm16038-201ENSMUST00000159317 193 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.49□□□□□ -1.53
SgcbP82349 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm22716-201ENSMUST00000177596 107 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm23144-201ENSMUST00000180226 107 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm29519-201ENSMUST00000186994 398 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm37272-201ENSMUST00000193401 488 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SgcbP82349 Gm43561-201ENSMUST00000199866 448 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm44959-201ENSMUST00000209127 231 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.49□□□□□ -1.53
SgcbP82349 Gm8863-201ENSMUST00000216630 926 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.49□□□□□ -1.53
SgcbP82349 Gm9292-201ENSMUST00000222008 710 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC5.49□□□□□ -1.53
SgcbP82349 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.49□□□□□ -1.53
SgcbP82349 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm23515-201ENSMUST00000082829 107 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SgcbP82349 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SgcbP82349 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.49□□□□□ -1.53
SgcbP82349 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
SgcbP82349 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
SgcbP82349 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SgcbP82349 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SgcbP82349 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SgcbP82349 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SgcbP82349 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SgcbP82349 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SgcbP82349 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SgcbP82349 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SgcbP82349 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SgcbP82349 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.49□□□□□ -1.53
SgcbP82349 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SgcbP82349 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SgcbP82349 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SgcbP82349 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.48□□□□□ -1.53
SgcbP82349 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SgcbP82349 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SgcbP82349 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SgcbP82349 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SgcbP82349 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SgcbP82349 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SgcbP82349 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.48□□□□□ -1.53
SgcbP82349 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SgcbP82349 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SgcbP82349 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SgcbP82349 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SgcbP82349 AC160115.1-201ENSMUST00000224678 1574 ntBASIC5.48□□□□□ -1.53
SgcbP82349 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SgcbP82349 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SgcbP82349 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SgcbP82349 Gm22953-201ENSMUST00000116724 101 ntBASIC5.48□□□□□ -1.53
SgcbP82349 Gm8692-201ENSMUST00000118102 438 ntBASIC5.48□□□□□ -1.53
SgcbP82349 Gm13835-201ENSMUST00000118459 685 ntBASIC5.48□□□□□ -1.53
SgcbP82349 Gm12053-201ENSMUST00000119022 252 ntBASIC5.48□□□□□ -1.53
SgcbP82349 Gm11862-201ENSMUST00000119678 659 ntBASIC5.48□□□□□ -1.53
SgcbP82349 Gm12618-201ENSMUST00000121754 483 ntBASIC5.48□□□□□ -1.53
SgcbP82349 Gm15237-201ENSMUST00000122104 469 ntBASIC5.48□□□□□ -1.53
SgcbP82349 Gm25808-201ENSMUST00000122784 284 ntBASIC5.48□□□□□ -1.53
SgcbP82349 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.48□□□□□ -1.53
SgcbP82349 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.48□□□□□ -1.53
SgcbP82349 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC5.48□□□□□ -1.53
SgcbP82349 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.48□□□□□ -1.53
SgcbP82349 Gm26346-201ENSMUST00000157525 329 ntBASIC5.48□□□□□ -1.53
SgcbP82349 Gm22136-201ENSMUST00000158751 268 ntBASIC5.48□□□□□ -1.53
SgcbP82349 Gm15900-201ENSMUST00000161584 342 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms