Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Platr25-208ENSMUST00000222602 939 ntBASIC5.09□□□□□ -1.59
CiitaP79621 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.09□□□□□ -1.59
CiitaP79621 CT025525.3-201ENSMUST00000228858 366 ntBASIC5.09□□□□□ -1.59
CiitaP79621 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CiitaP79621 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CiitaP79621 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CiitaP79621 Gm22350-201ENSMUST00000083924 156 ntBASIC5.09□□□□□ -1.59
CiitaP79621 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CiitaP79621 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.08□□□□□ -1.6
CiitaP79621 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CiitaP79621 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CiitaP79621 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CiitaP79621 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CiitaP79621 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.08□□□□□ -1.6
CiitaP79621 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CiitaP79621 Gm11719-201ENSMUST00000119399 351 ntBASIC5.08□□□□□ -1.6
CiitaP79621 Gm12466-201ENSMUST00000121199 620 ntBASIC5.08□□□□□ -1.6
CiitaP79621 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CiitaP79621 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CiitaP79621 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.08□□□□□ -1.6
CiitaP79621 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.08□□□□□ -1.6
CiitaP79621 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.08□□□□□ -1.6
CiitaP79621 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.08□□□□□ -1.6
CiitaP79621 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.08□□□□□ -1.6
CiitaP79621 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.08□□□□□ -1.6
CiitaP79621 Mir1947-201ENSMUST00000158235 85 ntBASIC5.08□□□□□ -1.6
CiitaP79621 Gm25714-201ENSMUST00000158626 296 ntBASIC5.08□□□□□ -1.6
CiitaP79621 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC5.08□□□□□ -1.6
CiitaP79621 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CiitaP79621 Mir1264-201ENSMUST00000175381 86 ntBASIC5.08□□□□□ -1.6
CiitaP79621 Gm18595-201ENSMUST00000175736 1068 ntBASIC5.08□□□□□ -1.6
CiitaP79621 Mir6418-201ENSMUST00000185075 115 ntBASIC5.08□□□□□ -1.6
CiitaP79621 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.08□□□□□ -1.6
CiitaP79621 Gm29513-201ENSMUST00000185741 202 ntBASIC5.08□□□□□ -1.6
CiitaP79621 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.08□□□□□ -1.6
CiitaP79621 Gm3145-201ENSMUST00000188584 220 ntBASIC5.08□□□□□ -1.6
CiitaP79621 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC5.08□□□□□ -1.6
CiitaP79621 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC5.08□□□□□ -1.6
CiitaP79621 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.08□□□□□ -1.6
CiitaP79621 Gm45651-201ENSMUST00000210857 335 ntBASIC5.08□□□□□ -1.6
CiitaP79621 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CiitaP79621 Gm18442-201ENSMUST00000220925 639 ntBASIC5.08□□□□□ -1.6
CiitaP79621 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC5.08□□□□□ -1.6
CiitaP79621 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.08□□□□□ -1.6
CiitaP79621 AC124408.1-201ENSMUST00000228938 707 ntBASIC5.08□□□□□ -1.6
CiitaP79621 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CiitaP79621 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CiitaP79621 Gm8724-201ENSMUST00000081668 483 ntBASIC5.08□□□□□ -1.6
CiitaP79621 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.08□□□□□ -1.6
CiitaP79621 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CiitaP79621 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CiitaP79621 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
CiitaP79621 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CiitaP79621 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.08□□□□□ -1.6
CiitaP79621 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CiitaP79621 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.08□□□□□ -1.6
CiitaP79621 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CiitaP79621 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CiitaP79621 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CiitaP79621 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CiitaP79621 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.08□□□□□ -1.6
CiitaP79621 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CiitaP79621 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CiitaP79621 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CiitaP79621 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CiitaP79621 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CiitaP79621 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CiitaP79621 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CiitaP79621 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CiitaP79621 Gm37407-201ENSMUST00000194793 1316 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Gm44897-201ENSMUST00000206187 1341 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CiitaP79621 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CiitaP79621 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CiitaP79621 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CiitaP79621 Gm24469-201ENSMUST00000104487 131 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Gm22498-201ENSMUST00000104497 86 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CiitaP79621 Gm13321-201ENSMUST00000117101 400 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Gm13491-201ENSMUST00000118267 235 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Gm15333-201ENSMUST00000118825 364 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.07□□□□□ -1.6
CiitaP79621 Gm24441-201ENSMUST00000157235 281 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Gm23906-201ENSMUST00000157573 128 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Gm24402-201ENSMUST00000157873 91 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.07□□□□□ -1.6
CiitaP79621 Gm27165-201ENSMUST00000183951 232 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Gm27568-201ENSMUST00000184220 99 ntBASIC5.07□□□□□ -1.6
CiitaP79621 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CiitaP79621 Gm29556-201ENSMUST00000187591 696 ntBASIC5.07□□□□□ -1.6
CiitaP79621 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Gm44474-201ENSMUST00000196525 127 ntBASIC5.07□□□□□ -1.6
CiitaP79621 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CiitaP79621 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.07□□□□□ -1.6
CiitaP79621 Gm9245-201ENSMUST00000200528 983 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC5.07□□□□□ -1.6
CiitaP79621 Gm5649-201ENSMUST00000217918 951 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms