Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.17□□□□□ -1.74
Cdx2P43241 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.17□□□□□ -1.74
Cdx2P43241 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Cdx2P43241 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Cdx2P43241 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.17□□□□□ -1.74
Cdx2P43241 Gm13787-201ENSMUST00000120422 168 ntBASIC4.17□□□□□ -1.74
Cdx2P43241 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.17□□□□□ -1.74
Cdx2P43241 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx2P43241 Gm23855-201ENSMUST00000158377 135 ntBASIC4.17□□□□□ -1.74
Cdx2P43241 Gm23207-201ENSMUST00000158665 102 ntBASIC4.17□□□□□ -1.74
Cdx2P43241 Mir5106-201ENSMUST00000174936 73 ntBASIC4.17□□□□□ -1.74
Cdx2P43241 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.17□□□□□ -1.74
Cdx2P43241 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Cdx2P43241 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx2P43241 Gm38166-201ENSMUST00000191660 471 ntBASIC4.17□□□□□ -1.74
Cdx2P43241 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx2P43241 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.17□□□□□ -1.74
Cdx2P43241 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.17□□□□□ -1.74
Cdx2P43241 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx2P43241 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.17□□□□□ -1.74
Cdx2P43241 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.17□□□□□ -1.74
Cdx2P43241 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.17□□□□□ -1.74
Cdx2P43241 Gm18507-201ENSMUST00000218855 525 ntBASIC4.17□□□□□ -1.74
Cdx2P43241 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.17□□□□□ -1.74
Cdx2P43241 CT025523.1-201ENSMUST00000228318 694 ntBASIC4.17□□□□□ -1.74
Cdx2P43241 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx2P43241 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx2P43241 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.17□□□□□ -1.74
Cdx2P43241 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx2P43241 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx2P43241 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Cdx2P43241 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
Cdx2P43241 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.17□□□□□ -1.74
Cdx2P43241 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.17□□□□□ -1.74
Cdx2P43241 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx2P43241 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx2P43241 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cdx2P43241 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.16□□□□□ -1.74
Cdx2P43241 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cdx2P43241 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cdx2P43241 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cdx2P43241 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.16□□□□□ -1.74
Cdx2P43241 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cdx2P43241 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cdx2P43241 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cdx2P43241 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cdx2P43241 Gm15057-201ENSMUST00000121516 534 ntBASIC4.16□□□□□ -1.74
Cdx2P43241 Gm12340-201ENSMUST00000121617 462 ntBASIC4.16□□□□□ -1.74
Cdx2P43241 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cdx2P43241 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cdx2P43241 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.16□□□□□ -1.74
Cdx2P43241 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cdx2P43241 Gm18547-201ENSMUST00000192439 811 ntBASIC4.16□□□□□ -1.74
Cdx2P43241 Gm9245-201ENSMUST00000200528 983 ntBASIC4.16□□□□□ -1.74
Cdx2P43241 Gm6261-201ENSMUST00000204707 760 ntBASIC4.16□□□□□ -1.74
Cdx2P43241 Gm17811-201ENSMUST00000206193 387 ntBASIC4.16□□□□□ -1.74
Cdx2P43241 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.16□□□□□ -1.74
Cdx2P43241 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cdx2P43241 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.16□□□□□ -1.74
Cdx2P43241 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cdx2P43241 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.16□□□□□ -1.74
Cdx2P43241 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cdx2P43241 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.16□□□□□ -1.74
Cdx2P43241 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cdx2P43241 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Cdx2P43241 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Cdx2P43241 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.15□□□□□ -1.74
Cdx2P43241 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Cdx2P43241 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
Cdx2P43241 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Cdx2P43241 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.15□□□□□ -1.75
Cdx2P43241 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Cdx2P43241 Gm11742-201ENSMUST00000119903 233 ntBASIC4.15□□□□□ -1.75
Cdx2P43241 Gm13902-201ENSMUST00000120168 605 ntBASIC4.15□□□□□ -1.75
Cdx2P43241 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.15□□□□□ -1.75
Cdx2P43241 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.15□□□□□ -1.75
Cdx2P43241 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.15□□□□□ -1.75
Cdx2P43241 Gm23496-201ENSMUST00000157741 248 ntBASIC4.15□□□□□ -1.75
Cdx2P43241 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Cdx2P43241 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Cdx2P43241 Gm4134-201ENSMUST00000173244 563 ntBASIC4.15□□□□□ -1.75
Cdx2P43241 Gm25748-201ENSMUST00000175487 70 ntBASIC4.15□□□□□ -1.75
Cdx2P43241 Gm23816-201ENSMUST00000179617 132 ntBASIC4.15□□□□□ -1.75
Cdx2P43241 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC4.15□□□□□ -1.75
Cdx2P43241 Mir7658-201ENSMUST00000184043 57 ntBASIC4.15□□□□□ -1.75
Cdx2P43241 Gm8296-201ENSMUST00000185597 524 ntBASIC4.15□□□□□ -1.75
Cdx2P43241 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.15□□□□□ -1.75
Cdx2P43241 Gm43037-201ENSMUST00000196808 250 ntBASIC4.15□□□□□ -1.75
Cdx2P43241 Gm4410-201ENSMUST00000199349 686 ntBASIC4.15□□□□□ -1.75
Cdx2P43241 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.15□□□□□ -1.75
Cdx2P43241 Gm17779-201ENSMUST00000213395 394 ntBASIC4.15□□□□□ -1.75
Cdx2P43241 AC163631.1-201ENSMUST00000225041 598 ntBASIC4.15□□□□□ -1.75
Cdx2P43241 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
Cdx2P43241 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Cdx2P43241 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.15□□□□□ -1.75
Cdx2P43241 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Cdx2P43241 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Cdx2P43241 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Cdx2P43241 AC154368.2-201ENSMUST00000222334 1724 ntBASIC4.15□□□□□ -1.75
Cdx2P43241 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms