Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cxcl12P40224 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.49□□□□□ -1.69
Cxcl12P40224 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Cxcl12P40224 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.49□□□□□ -1.69
Cxcl12P40224 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Cxcl12P40224 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cxcl12P40224 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cxcl12P40224 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cxcl12P40224 Gm12931-201ENSMUST00000117046 324 ntBASIC4.49□□□□□ -1.69
Cxcl12P40224 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.49□□□□□ -1.69
Cxcl12P40224 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cxcl12P40224 Gm23391-201ENSMUST00000157579 104 ntBASIC4.49□□□□□ -1.69
Cxcl12P40224 Gm24850-201ENSMUST00000158029 119 ntBASIC4.49□□□□□ -1.69
Cxcl12P40224 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cxcl12P40224 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.49□□□□□ -1.69
Cxcl12P40224 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cxcl12P40224 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.49□□□□□ -1.69
Cxcl12P40224 Gm37173-201ENSMUST00000194498 1017 ntBASIC4.49□□□□□ -1.69
Cxcl12P40224 Gm37791-201ENSMUST00000195081 286 ntBASIC4.49□□□□□ -1.69
Cxcl12P40224 Gm44023-201ENSMUST00000203710 469 ntBASIC4.49□□□□□ -1.69
Cxcl12P40224 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.49□□□□□ -1.69
Cxcl12P40224 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.49□□□□□ -1.69
Cxcl12P40224 Gm18120-201ENSMUST00000220079 511 ntBASIC4.49□□□□□ -1.69
Cxcl12P40224 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.49□□□□□ -1.69
Cxcl12P40224 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
Cxcl12P40224 Gm26063-201ENSMUST00000083378 107 ntBASIC4.49□□□□□ -1.69
Cxcl12P40224 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cxcl12P40224 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cxcl12P40224 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cxcl12P40224 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC4.49□□□□□ -1.69
Cxcl12P40224 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cxcl12P40224 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cxcl12P40224 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cxcl12P40224 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cxcl12P40224 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cxcl12P40224 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.49□□□□□ -1.69
Cxcl12P40224 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cxcl12P40224 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cxcl12P40224 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Cxcl12P40224 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cxcl12P40224 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cxcl12P40224 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Cxcl12P40224 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cxcl12P40224 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cxcl12P40224 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cxcl12P40224 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cxcl12P40224 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cxcl12P40224 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm14299-201ENSMUST00000117586 397 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm11393-201ENSMUST00000118019 288 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm11212-201ENSMUST00000118337 618 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm13690-201ENSMUST00000118989 285 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm26347-201ENSMUST00000157526 131 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm24314-201ENSMUST00000158274 123 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm16378-201ENSMUST00000179168 342 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cxcl12P40224 Mir6996-201ENSMUST00000183922 61 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.48□□□□□ -1.69
Cxcl12P40224 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm29452-201ENSMUST00000187996 313 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm28860-201ENSMUST00000188103 313 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm37881-201ENSMUST00000193001 421 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm37104-201ENSMUST00000193278 196 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm42428-201ENSMUST00000198677 302 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm44003-201ENSMUST00000203024 490 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm18011-201ENSMUST00000203717 565 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.48□□□□□ -1.69
Cxcl12P40224 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.48□□□□□ -1.69
Cxcl12P40224 AC132260.2-201ENSMUST00000224482 344 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 AC154634.3-201ENSMUST00000224589 736 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 AC140209.1-201ENSMUST00000227875 284 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cxcl12P40224 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cxcl12P40224 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cxcl12P40224 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cxcl12P40224 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cxcl12P40224 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm19514-201ENSMUST00000206856 4489 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm4991-201ENSMUST00000118899 1552 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm37776-201ENSMUST00000193471 2497 ntBASIC4.48□□□□□ -1.69
Cxcl12P40224 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cxcl12P40224 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Cxcl12P40224 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cxcl12P40224 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Cxcl12P40224 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms