Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.26□□□□□ -1.57
LdlrP35951 Gm27754-201ENSMUST00000183340 126 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Mir6417-201ENSMUST00000183815 116 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm27964-201ENSMUST00000185195 62 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm28429-201ENSMUST00000188521 363 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm17981-201ENSMUST00000191109 739 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm19777-201ENSMUST00000191940 358 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm6543-201ENSMUST00000197353 808 ntBASIC5.26□□□□□ -1.57
LdlrP35951 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LdlrP35951 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LdlrP35951 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LdlrP35951 Gm44281-201ENSMUST00000203090 166 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC5.26□□□□□ -1.57
LdlrP35951 Gm2961-201ENSMUST00000211074 772 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.26□□□□□ -1.57
LdlrP35951 Gm18850-201ENSMUST00000211578 388 ntBASIC5.26□□□□□ -1.57
LdlrP35951 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.26□□□□□ -1.57
LdlrP35951 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.26□□□□□ -1.57
LdlrP35951 AC167977.1-201ENSMUST00000221384 234 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.26□□□□□ -1.57
LdlrP35951 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm23628-201ENSMUST00000082464 173 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LdlrP35951 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LdlrP35951 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
LdlrP35951 Gm13310-201ENSMUST00000120962 1381 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.26□□□□□ -1.57
LdlrP35951 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.26□□□□□ -1.57
LdlrP35951 Gm43498-201ENSMUST00000202002 1486 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.26□□□□□ -1.57
LdlrP35951 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.25□□□□□ -1.57
LdlrP35951 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LdlrP35951 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm14404-201ENSMUST00000119117 1660 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LdlrP35951 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
LdlrP35951 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LdlrP35951 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LdlrP35951 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LdlrP35951 Gm16082-201ENSMUST00000115992 377 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm14175-201ENSMUST00000119835 241 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm5383-201ENSMUST00000121177 617 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.25□□□□□ -1.57
LdlrP35951 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5.25□□□□□ -1.57
LdlrP35951 Gm23546-201ENSMUST00000158211 137 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm6647-201ENSMUST00000170514 641 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm20462-201ENSMUST00000172623 408 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm21754-201ENSMUST00000177550 479 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC5.25□□□□□ -1.57
LdlrP35951 Gm27522-201ENSMUST00000183949 230 ntBASIC5.25□□□□□ -1.57
LdlrP35951 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC5.25□□□□□ -1.57
LdlrP35951 Gm28560-201ENSMUST00000186091 315 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm28740-201ENSMUST00000186142 215 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm28334-201ENSMUST00000186653 315 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm28495-201ENSMUST00000188452 315 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm28232-201ENSMUST00000188683 315 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm28481-201ENSMUST00000189231 315 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm29376-201ENSMUST00000189357 835 ntBASIC5.25□□□□□ -1.57
LdlrP35951 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LdlrP35951 Gm29059-201ENSMUST00000191534 315 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm37765-201ENSMUST00000192395 315 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm37237-201ENSMUST00000192893 315 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm36968-201ENSMUST00000193737 315 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm37659-201ENSMUST00000194574 111 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.25□□□□□ -1.57
LdlrP35951 Gm38290-201ENSMUST00000195238 315 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.25□□□□□ -1.57
LdlrP35951 Gm35648-201ENSMUST00000202304 475 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm4874-201ENSMUST00000203589 691 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm44277-201ENSMUST00000205128 649 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm44132-201ENSMUST00000205142 151 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm44539-201ENSMUST00000206010 238 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm45034-201ENSMUST00000206831 482 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm5649-201ENSMUST00000217918 951 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm4057-201ENSMUST00000221407 368 ntBASIC5.25□□□□□ -1.57
LdlrP35951 AC116589.3-202ENSMUST00000221770 649 ntBASIC5.25□□□□□ -1.57
LdlrP35951 AC164117.2-201ENSMUST00000222090 327 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.25□□□□□ -1.57
LdlrP35951 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
LdlrP35951 AC116589.6-201ENSMUST00000222252 649 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Zfp429-203ENSMUST00000224684 524 ntBASIC5.25□□□□□ -1.57
LdlrP35951 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.25□□□□□ -1.57
LdlrP35951 AC118639.1-204ENSMUST00000226401 694 ntBASIC5.25□□□□□ -1.57
LdlrP35951 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LdlrP35951 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LdlrP35951 Gm24254-201ENSMUST00000083702 104 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LdlrP35951 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.25□□□□□ -1.57
LdlrP35951 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
LdlrP35951 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LdlrP35951 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC5.25□□□□□ -1.57
LdlrP35951 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LdlrP35951 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LdlrP35951 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms