Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm12571-201ENSMUST00000118132 243 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm12852-201ENSMUST00000119478 719 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm13532-201ENSMUST00000120373 240 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm22312-201ENSMUST00000158005 130 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm23897-201ENSMUST00000158110 158 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Mir1947-201ENSMUST00000158235 85 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm3091-201ENSMUST00000163408 484 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm37241-201ENSMUST00000191736 523 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm37095-201ENSMUST00000195421 205 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm45081-201ENSMUST00000206281 572 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm45269-201ENSMUST00000210359 282 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm39197-201ENSMUST00000212069 457 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 AC121804.1-201ENSMUST00000221016 394 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 AC131117.2-203ENSMUST00000225886 950 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Mecom-201ENSMUST00000061088 348 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm23464-201ENSMUST00000083145 147 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Chmp6P0C0A3 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Gm14304-201ENSMUST00000117272 446 ntBASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Gm14067-201ENSMUST00000119340 314 ntBASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Gm12849-201ENSMUST00000120013 739 ntBASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Gm27805-201ENSMUST00000184513 79 ntBASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Gm4734-201ENSMUST00000200117 777 ntBASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Gm18100-201ENSMUST00000200897 452 ntBASIC4.75□□□□□ -1.65
Chmp6P0C0A3 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Gm44690-201ENSMUST00000207984 382 ntBASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Gm45690-201ENSMUST00000210775 246 ntBASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Gm17779-201ENSMUST00000213395 394 ntBASIC4.75□□□□□ -1.65
Chmp6P0C0A3 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.75□□□□□ -1.65
Chmp6P0C0A3 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.75□□□□□ -1.65
Chmp6P0C0A3 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.75□□□□□ -1.65
Chmp6P0C0A3 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.75□□□□□ -1.65
Chmp6P0C0A3 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm13386-201ENSMUST00000117677 124 ntBASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm15267-201ENSMUST00000120888 464 ntBASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm23501-201ENSMUST00000157744 256 ntBASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm26354-201ENSMUST00000158221 129 ntBASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Chmp6P0C0A3 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms