Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TnfP06804 Gm5258-201ENSMUST00000165437 327 ntBASIC4.6□□□□□ -1.67
TnfP06804 Mir5134-201ENSMUST00000175529 78 ntBASIC4.6□□□□□ -1.67
TnfP06804 Gm28304-201ENSMUST00000185977 312 ntBASIC4.6□□□□□ -1.67
TnfP06804 Gm9443-201ENSMUST00000188406 816 ntBASIC4.6□□□□□ -1.67
TnfP06804 Gm29256-201ENSMUST00000189094 312 ntBASIC4.6□□□□□ -1.67
TnfP06804 Gm28484-201ENSMUST00000190606 312 ntBASIC4.6□□□□□ -1.67
TnfP06804 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TnfP06804 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.6□□□□□ -1.67
TnfP06804 Gm6057-201ENSMUST00000195927 314 ntBASIC4.6□□□□□ -1.67
TnfP06804 Gm43044-201ENSMUST00000198091 379 ntBASIC4.6□□□□□ -1.67
TnfP06804 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TnfP06804 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TnfP06804 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TnfP06804 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC4.6□□□□□ -1.67
TnfP06804 Gm6171-201ENSMUST00000220760 645 ntBASIC4.6□□□□□ -1.67
TnfP06804 Gm272-201ENSMUST00000222073 919 ntBASIC4.6□□□□□ -1.67
TnfP06804 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TnfP06804 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TnfP06804 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TnfP06804 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TnfP06804 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TnfP06804 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TnfP06804 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TnfP06804 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TnfP06804 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TnfP06804 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TnfP06804 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TnfP06804 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
TnfP06804 Snord65-201ENSMUST00000104269 72 ntBASIC4.59□□□□□ -1.67
TnfP06804 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TnfP06804 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
TnfP06804 Gm13785-201ENSMUST00000119099 690 ntBASIC4.59□□□□□ -1.67
TnfP06804 Gm8200-201ENSMUST00000122390 222 ntBASIC4.59□□□□□ -1.67
TnfP06804 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TnfP06804 Gm4487-201ENSMUST00000150617 442 ntBASIC4.59□□□□□ -1.67
TnfP06804 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TnfP06804 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
TnfP06804 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.59□□□□□ -1.67
TnfP06804 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
TnfP06804 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.59□□□□□ -1.67
TnfP06804 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC4.59□□□□□ -1.67
TnfP06804 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.59□□□□□ -1.67
TnfP06804 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.59□□□□□ -1.67
TnfP06804 Gm4410-201ENSMUST00000199349 686 ntBASIC4.59□□□□□ -1.67
TnfP06804 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TnfP06804 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.59□□□□□ -1.67
TnfP06804 Gm44650-201ENSMUST00000206929 194 ntBASIC4.59□□□□□ -1.67
TnfP06804 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TnfP06804 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
TnfP06804 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.59□□□□□ -1.67
TnfP06804 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
TnfP06804 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.59□□□□□ -1.67
TnfP06804 AV026068-224ENSMUST00000224827 928 ntBASIC4.59□□□□□ -1.67
TnfP06804 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.59□□□□□ -1.67
TnfP06804 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TnfP06804 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
TnfP06804 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TnfP06804 Gm25134-201ENSMUST00000082646 160 ntBASIC4.59□□□□□ -1.67
TnfP06804 Mir346-201ENSMUST00000083547 98 ntBASIC4.59□□□□□ -1.67
TnfP06804 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.59□□□□□ -1.68
TnfP06804 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
TnfP06804 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
TnfP06804 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TnfP06804 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
TnfP06804 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
TnfP06804 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.58□□□□□ -1.68
TnfP06804 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TnfP06804 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.58□□□□□ -1.68
TnfP06804 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TnfP06804 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
TnfP06804 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.58□□□□□ -1.68
TnfP06804 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TnfP06804 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TnfP06804 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TnfP06804 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TnfP06804 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.58□□□□□ -1.68
TnfP06804 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TnfP06804 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
TnfP06804 Gm9427-201ENSMUST00000116187 651 ntBASIC4.58□□□□□ -1.68
TnfP06804 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC4.58□□□□□ -1.68
TnfP06804 Gm14753-201ENSMUST00000118503 246 ntBASIC4.58□□□□□ -1.68
TnfP06804 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.58□□□□□ -1.68
TnfP06804 Gm11398-201ENSMUST00000120330 320 ntBASIC4.58□□□□□ -1.68
TnfP06804 Gm9435-201ENSMUST00000120379 877 ntBASIC4.58□□□□□ -1.68
TnfP06804 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.58□□□□□ -1.68
TnfP06804 Gm5379-201ENSMUST00000120973 826 ntBASIC4.58□□□□□ -1.68
TnfP06804 Gm12978-201ENSMUST00000121250 522 ntBASIC4.58□□□□□ -1.68
TnfP06804 Gm3757-201ENSMUST00000125878 675 ntBASIC4.58□□□□□ -1.68
TnfP06804 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.58□□□□□ -1.68
TnfP06804 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.58□□□□□ -1.68
TnfP06804 Gm25965-201ENSMUST00000157170 93 ntBASIC4.58□□□□□ -1.68
TnfP06804 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TnfP06804 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TnfP06804 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TnfP06804 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
TnfP06804 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.58□□□□□ -1.68
TnfP06804 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.58□□□□□ -1.68
TnfP06804 Gm18306-201ENSMUST00000207338 569 ntBASIC4.58□□□□□ -1.68
TnfP06804 Gm21112-201ENSMUST00000212224 578 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms