Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm42661-201ENSMUST00000202364 1442 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm42561-201ENSMUST00000202563 1442 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm14857-201ENSMUST00000117862 3185 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm14751-201ENSMUST00000117693 222 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm16205-201ENSMUST00000117720 1027 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm15312-201ENSMUST00000118827 271 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm13887-201ENSMUST00000119009 344 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm11227-201ENSMUST00000119774 471 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm5405-201ENSMUST00000120478 609 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm15309-201ENSMUST00000121644 240 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm12358-201ENSMUST00000121842 520 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm7335-201ENSMUST00000172475 373 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm23872-201ENSMUST00000175432 77 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm6223-201ENSMUST00000178436 871 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm26925-201ENSMUST00000182470 957 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm27754-201ENSMUST00000183340 126 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm27355-201ENSMUST00000185045 128 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm29600-201ENSMUST00000188687 377 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm29545-201ENSMUST00000188878 694 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm19224-201ENSMUST00000190477 793 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm37243-201ENSMUST00000193407 595 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm37095-201ENSMUST00000195421 205 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm43276-201ENSMUST00000199712 364 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm2314-201ENSMUST00000200391 586 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm44673-201ENSMUST00000205692 996 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm45226-201ENSMUST00000206602 288 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm18541-201ENSMUST00000215935 538 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC4.56□□□□□ -1.68
Hoxa3P02831 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm32526-201ENSMUST00000221878 981 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 AC129085.4-201ENSMUST00000224536 570 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 AV026068-231ENSMUST00000225862 482 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 AC161383.1-201ENSMUST00000227356 527 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 AC154806.4-201ENSMUST00000227406 439 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 Mir188-201ENSMUST00000083464 68 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Mir449a-201ENSMUST00000083641 91 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxa3P02831 Gm37049-201ENSMUST00000194356 1983 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Fus-202ENSMUST00000079045 2623 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Hoxa3P02831 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Hoxa3P02831 LOC102637012-201ENSMUST00000217248 2562 ntBASIC4.56□□□□□ -1.68
Hoxa3P02831 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Hoxa3P02831 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Hoxa3P02831 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC4.55□□□□□ -1.68
Hoxa3P02831 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hoxa3P02831 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hoxa3P02831 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hoxa3P02831 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hoxa3P02831 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hoxa3P02831 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Hoxa3P02831 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.55□□□□□ -1.68
Hoxa3P02831 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hoxa3P02831 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Hoxa3P02831 Gm22771-201ENSMUST00000104449 91 ntBASIC4.55□□□□□ -1.68
Hoxa3P02831 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Hoxa3P02831 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Hoxa3P02831 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Hoxa3P02831 Gm23839-201ENSMUST00000116957 109 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms