Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC3.47□□□□□ -1.85
Hmgb3O54879 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC3.47□□□□□ -1.85
Hmgb3O54879 Gm45610-201ENSMUST00000209227 784 ntBASIC3.47□□□□□ -1.85
Hmgb3O54879 Gm45276-201ENSMUST00000209549 1086 ntBASIC3.47□□□□□ -1.85
Hmgb3O54879 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Hmgb3O54879 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC3.47□□□□□ -1.85
Hmgb3O54879 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Hmgb3O54879 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Hmgb3O54879 AC152979.3-201ENSMUST00000217720 479 ntBASIC3.47□□□□□ -1.85
Hmgb3O54879 Gm20368-201ENSMUST00000220716 301 ntBASIC3.47□□□□□ -1.85
Hmgb3O54879 Gm17915-201ENSMUST00000222077 548 ntBASIC3.47□□□□□ -1.85
Hmgb3O54879 AC116724.1-201ENSMUST00000227900 972 ntBASIC3.47□□□□□ -1.85
Hmgb3O54879 AC098742.1-201ENSMUST00000227945 373 ntBASIC3.47□□□□□ -1.85
Hmgb3O54879 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Hmgb3O54879 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Hmgb3O54879 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Hmgb3O54879 Snord21-201ENSMUST00000082519 94 ntBASIC3.47□□□□□ -1.85
Hmgb3O54879 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Hmgb3O54879 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Hmgb3O54879 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Hmgb3O54879 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Hmgb3O54879 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC3.47□□□□□ -1.85
Hmgb3O54879 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC3.47□□□□□ -1.85
Hmgb3O54879 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Hmgb3O54879 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Hmgb3O54879 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Hmgb3O54879 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm22273-201ENSMUST00000104040 132 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm25096-201ENSMUST00000104043 129 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm24251-201ENSMUST00000157324 114 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm24685-201ENSMUST00000157764 285 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm17044-201ENSMUST00000168549 828 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm8214-201ENSMUST00000172123 351 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm21850-201ENSMUST00000179792 359 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Hmgb3O54879 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC3.46□□□□□ -1.86
Hmgb3O54879 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm18900-201ENSMUST00000193218 584 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm43382-201ENSMUST00000198954 838 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 AC120011.1-201ENSMUST00000202147 744 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm19065-202ENSMUST00000203910 1165 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Hmgb3O54879 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Hmgb3O54879 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 AC121986.1-201ENSMUST00000218588 781 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Hmgb3O54879 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm19195-201ENSMUST00000222018 511 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 Prl7a1-203ENSMUST00000224852 1283 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 AC154806.4-201ENSMUST00000227406 439 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
Hmgb3O54879 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Hmgb3O54879 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.46□□□□□ -1.86
Hmgb3O54879 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Hmgb3O54879 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Hmgb3O54879 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm37718-201ENSMUST00000191655 2631 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm37114-201ENSMUST00000195065 1804 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm11432-201ENSMUST00000117334 231 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm12186-201ENSMUST00000119050 945 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm11481-201ENSMUST00000120069 255 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm13092-201ENSMUST00000136346 260 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Hmgb3O54879 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC3.45□□□□□ -1.86
Hmgb3O54879 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm8837-201ENSMUST00000161037 1107 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm3076-201ENSMUST00000161613 451 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm26460-201ENSMUST00000175061 126 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm28094-201ENSMUST00000185262 390 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm28859-201ENSMUST00000186650 616 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm28186-201ENSMUST00000187447 679 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm3496-201ENSMUST00000188283 745 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm19057-201ENSMUST00000194329 1197 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm43856-201ENSMUST00000197004 369 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm42566-201ENSMUST00000197120 643 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm42999-201ENSMUST00000198049 786 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm42652-201ENSMUST00000199073 614 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm44604-201ENSMUST00000205475 496 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm44603-201ENSMUST00000206820 367 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm5418-201ENSMUST00000206932 528 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 114.6 ms