Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm4322-201ENSMUST00000191094 336 ntBASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm8748-201ENSMUST00000211125 587 ntBASIC3.55□□□□□ -1.84
Col6a4A2AX52 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.55□□□□□ -1.84
Col6a4A2AX52 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.55□□□□□ -1.84
Col6a4A2AX52 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Col6a4A2AX52 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a4A2AX52 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Col6a4A2AX52 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Col6a4A2AX52 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm11484-201ENSMUST00000119808 338 ntBASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm14587-201ENSMUST00000121714 658 ntBASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm14473-201ENSMUST00000122269 557 ntBASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm42453-201ENSMUST00000200477 409 ntBASIC3.55□□□□□ -1.84
Col6a4A2AX52 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.55□□□□□ -1.84
Col6a4A2AX52 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col6a4A2AX52 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm42842-201ENSMUST00000197736 3004 ntBASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm37268-201ENSMUST00000192254 2614 ntBASIC3.55□□□□□ -1.84
Col6a4A2AX52 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
Col6a4A2AX52 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm3675-201ENSMUST00000175904 1653 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm6558-201ENSMUST00000191934 1973 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm23133-201ENSMUST00000104255 135 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm11255-201ENSMUST00000120448 1180 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col6a4A2AX52 Stk-ps2-204ENSMUST00000187808 616 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm19124-201ENSMUST00000191041 832 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm37073-201ENSMUST00000192469 1222 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm43304-201ENSMUST00000196803 326 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm44779-201ENSMUST00000206937 708 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a4A2AX52 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm23736-201ENSMUST00000082553 75 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col6a4A2AX52 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Col6a4A2AX52 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm42494-201ENSMUST00000196515 3051 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm22514-201ENSMUST00000122547 308 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm25177-201ENSMUST00000122634 117 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm8939-201ENSMUST00000192577 964 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm18403-201ENSMUST00000192907 529 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm44824-201ENSMUST00000207021 229 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm39197-201ENSMUST00000212069 457 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a4A2AX52 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.54□□□□□ -1.84
Col6a4A2AX52 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a4A2AX52 Gm43317-201ENSMUST00000197924 2544 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col6a4A2AX52 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.54□□□□□ -1.84
Col6a4A2AX52 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gm37527-201ENSMUST00000192406 3547 ntBASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gm15185-201ENSMUST00000117397 746 ntBASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gm11393-201ENSMUST00000118019 288 ntBASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gm12103-201ENSMUST00000121892 362 ntBASIC3.53□□□□□ -1.84
Col6a4A2AX52 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a4A2AX52 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a4A2AX52 AC159244.1-201ENSMUST00000220964 594 ntBASIC3.53□□□□□ -1.84
Col6a4A2AX52 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.53□□□□□ -1.84
Col6a4A2AX52 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gm25765-201ENSMUST00000104100 132 ntBASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gm22320-201ENSMUST00000157149 312 ntBASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gm18429-201ENSMUST00000198707 421 ntBASIC3.53□□□□□ -1.84
Col6a4A2AX52 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.53□□□□□ -1.84
Col6a4A2AX52 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC3.53□□□□□ -1.84
Col6a4A2AX52 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms