Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Scn1aA2APX8 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.36□□□□□ -1.71
Scn1aA2APX8 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Scn1aA2APX8 Gm12571-201ENSMUST00000118132 243 ntBASIC4.36□□□□□ -1.71
Scn1aA2APX8 Gm13214-201ENSMUST00000122137 408 ntBASIC4.36□□□□□ -1.71
Scn1aA2APX8 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.36□□□□□ -1.71
Scn1aA2APX8 Gm7241-201ENSMUST00000159853 357 ntBASIC4.36□□□□□ -1.71
Scn1aA2APX8 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.36□□□□□ -1.71
Scn1aA2APX8 Gm4854-201ENSMUST00000185902 574 ntBASIC4.36□□□□□ -1.71
Scn1aA2APX8 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.36□□□□□ -1.71
Scn1aA2APX8 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Scn1aA2APX8 Gm31931-201ENSMUST00000219666 222 ntBASIC4.36□□□□□ -1.71
Scn1aA2APX8 CT009754.4-201ENSMUST00000221430 565 ntBASIC4.36□□□□□ -1.71
Scn1aA2APX8 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Scn1aA2APX8 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Scn1aA2APX8 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.36□□□□□ -1.71
Scn1aA2APX8 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Scn1aA2APX8 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Scn1aA2APX8 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.36□□□□□ -1.71
Scn1aA2APX8 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Scn1aA2APX8 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.36□□□□□ -1.71
Scn1aA2APX8 Gm7618-201ENSMUST00000121643 171 ntBASIC4.36□□□□□ -1.71
Scn1aA2APX8 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.36□□□□□ -1.71
Scn1aA2APX8 Gm28396-201ENSMUST00000190309 379 ntBASIC4.36□□□□□ -1.71
Scn1aA2APX8 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC4.36□□□□□ -1.71
Scn1aA2APX8 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.36□□□□□ -1.71
Scn1aA2APX8 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Scn1aA2APX8 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Scn1aA2APX8 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Scn1aA2APX8 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.36□□□□□ -1.71
Scn1aA2APX8 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Scn1aA2APX8 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.35□□□□□ -1.71
Scn1aA2APX8 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Neat1-201ENSMUST00000173672 20771 ntBASIC4.35□□□□□ -1.71
Scn1aA2APX8 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Gm38248-201ENSMUST00000193744 5783 ntBASIC4.35□□□□□ -1.71
Scn1aA2APX8 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Gm9003-201ENSMUST00000121810 482 ntBASIC4.35□□□□□ -1.71
Scn1aA2APX8 Gm12087-201ENSMUST00000121878 258 ntBASIC4.35□□□□□ -1.71
Scn1aA2APX8 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.35□□□□□ -1.71
Scn1aA2APX8 Gm27976-201ENSMUST00000183635 162 ntBASIC4.35□□□□□ -1.71
Scn1aA2APX8 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Scn1aA2APX8 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC4.35□□□□□ -1.71
Scn1aA2APX8 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.35□□□□□ -1.71
Scn1aA2APX8 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Gm8288-201ENSMUST00000223406 593 ntBASIC4.35□□□□□ -1.71
Scn1aA2APX8 AC124408.1-201ENSMUST00000228938 707 ntBASIC4.35□□□□□ -1.71
Scn1aA2APX8 AC154838.1-201ENSMUST00000228944 911 ntBASIC4.35□□□□□ -1.71
Scn1aA2APX8 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.35□□□□□ -1.71
Scn1aA2APX8 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.35□□□□□ -1.71
Scn1aA2APX8 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Scn1aA2APX8 Gm26273-201ENSMUST00000104180 131 ntBASIC4.34□□□□□ -1.71
Scn1aA2APX8 Gm24318-201ENSMUST00000104490 131 ntBASIC4.34□□□□□ -1.71
Scn1aA2APX8 Gm13973-201ENSMUST00000121371 894 ntBASIC4.34□□□□□ -1.71
Scn1aA2APX8 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.34□□□□□ -1.71
Scn1aA2APX8 Gm26219-201ENSMUST00000175216 71 ntBASIC4.34□□□□□ -1.71
Scn1aA2APX8 Gm27828-201ENSMUST00000184108 119 ntBASIC4.34□□□□□ -1.71
Scn1aA2APX8 Gm8820-201ENSMUST00000204077 571 ntBASIC4.34□□□□□ -1.71
Scn1aA2APX8 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.34□□□□□ -1.71
Scn1aA2APX8 Gm6562-201ENSMUST00000221903 464 ntBASIC4.34□□□□□ -1.71
Scn1aA2APX8 Mir215-201ENSMUST00000083628 112 ntBASIC4.34□□□□□ -1.71
Scn1aA2APX8 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Scn1aA2APX8 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Scn1aA2APX8 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Scn1aA2APX8 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Scn1aA2APX8 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.34□□□□□ -1.71
Scn1aA2APX8 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.34□□□□□ -1.71
Scn1aA2APX8 Gm23319-201ENSMUST00000104467 131 ntBASIC4.34□□□□□ -1.71
Scn1aA2APX8 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Scn1aA2APX8 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Scn1aA2APX8 Gm22852-201ENSMUST00000177899 101 ntBASIC4.34□□□□□ -1.71
Scn1aA2APX8 Gm28660-201ENSMUST00000186496 253 ntBASIC4.34□□□□□ -1.71
Scn1aA2APX8 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.34□□□□□ -1.71
Scn1aA2APX8 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.34□□□□□ -1.71
Scn1aA2APX8 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.34□□□□□ -1.71
Scn1aA2APX8 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Scn1aA2APX8 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
Scn1aA2APX8 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Scn1aA2APX8 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
Scn1aA2APX8 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
Scn1aA2APX8 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Scn1aA2APX8 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
Scn1aA2APX8 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Scn1aA2APX8 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms