Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm7206-201ENSMUST00000117730 508 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm11197-201ENSMUST00000145158 839 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm24687-201ENSMUST00000157758 241 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm27733-201ENSMUST00000184803 68 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm28996-201ENSMUST00000190316 721 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm21735-201ENSMUST00000190360 696 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm29038-201ENSMUST00000191543 678 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm37215-201ENSMUST00000194927 1259 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm2623-201ENSMUST00000199229 286 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm7041-201ENSMUST00000201227 524 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm5358-201ENSMUST00000212814 353 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 AC132104.1-201ENSMUST00000213615 260 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm46191-201ENSMUST00000218899 433 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 AC132833.3-201ENSMUST00000227472 866 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.1□□□□□ -1.75
Trem1Q9JKE2 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Mir92b-201ENSMUST00000102300 83 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm12423-201ENSMUST00000118334 135 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm11404-201ENSMUST00000120872 494 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm15428-201ENSMUST00000121352 333 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm24065-201ENSMUST00000157487 264 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm24295-201ENSMUST00000158298 131 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm24930-201ENSMUST00000158315 83 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm6055-201ENSMUST00000180532 378 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm27718-201ENSMUST00000183721 86 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm28920-201ENSMUST00000189957 699 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm43580-201ENSMUST00000202892 284 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm7407-201ENSMUST00000208301 568 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm6477-201ENSMUST00000217098 764 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trem1Q9JKE2 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.09□□□□□ -1.75
Trem1Q9JKE2 Mir331-201ENSMUST00000083673 96 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms