Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm22857-201ENSMUST00000174969 134 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Dlx6os1-204ENSMUST00000184182 146 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm18150-201ENSMUST00000195341 645 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm45236-201ENSMUST00000208632 229 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm45392-201ENSMUST00000210441 214 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Olfr881-201ENSMUST00000074611 948 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm15766-201ENSMUST00000118025 813 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm15785-201ENSMUST00000119145 694 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm14067-201ENSMUST00000119340 314 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm14725-201ENSMUST00000120324 828 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm15168-201ENSMUST00000121057 316 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm23513-201ENSMUST00000158181 133 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm27468-201ENSMUST00000183577 106 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm28503-201ENSMUST00000185966 147 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm5368-201ENSMUST00000189012 589 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm8939-201ENSMUST00000192577 964 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm43856-201ENSMUST00000197004 369 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm42999-201ENSMUST00000198049 786 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm17956-201ENSMUST00000199931 838 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm5418-201ENSMUST00000206932 528 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm42455-201ENSMUST00000199761 2736 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Gm7754-201ENSMUST00000223075 2064 ntBASIC4.25□□□□□ -1.73
Lima1Q9ERG0 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Gm26376-201ENSMUST00000104784 110 ntBASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Gm11914-201ENSMUST00000117094 507 ntBASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Gm12087-201ENSMUST00000121878 258 ntBASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Gm42566-201ENSMUST00000197120 643 ntBASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Gm5288-201ENSMUST00000198323 1119 ntBASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Gm43084-201ENSMUST00000200696 947 ntBASIC4.24□□□□□ -1.73
Lima1Q9ERG0 Gm45610-201ENSMUST00000209227 784 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms